Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.116711	Exosc9	exosome component 9	3		50911
Gene Ontology	3'-5' exoribonuclease activity | exonuclease activity | exosome (RNase complex) | hydrolase activity | nuclease activity | nucleolus | nucleus | RNA binding | RNA processing | rRNA processing
Human Homolog	EXOSC9[exosome component 9]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 102 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAAAAAAAAA (157) 47.3 0.0473 P8 Cb GC CAAATTAACC (2) 32.6 0.0326 P8 Cb GC CAAATTAAAA (5) 4.9 0.0049 P8 Cb GC TAAGACCTTA (5) 4.9 0.0049 P8 Cb GC AAAAATGTAG (4) 1.6 0.0016 P8 Cb GC AAAATGTGAA 1.6 0.0016 P8 Cb GC TCCTCTGGGG (4) 1.6 0.0016 P8 Cb GC TGTCTATTTG (2) 1.6 0.0016 Cb medulloblastoma CAAAAAAAAA (157) 92.5 0.0925 Cb medulloblastoma TAAGACCTTA (5) 4.6 0.0046 Cb medulloblastoma AAAAATGTAG (4) 2.3 0.0023 P8 GC+1d culture CAAAAAAAAA (157) 37.7 0.0377 P8 GC+1d culture CAAATTAACC (2) 10.3 0.0103 P8 GC+1d culture CAAATTAAAA (5) 3.4 0.0034 P8 GC+1d culture TGTCTATTTG (2) 3.4 0.0034 P8 GC+1d culture TCCTCTGGGG (4) 2.3 0.0023 P8 GC+1d culture AGTTGGGAAG (3) 1.1 0.0011 P8 GC+1d culture TAAGACCTTA (5) 1.1 0.0011 P8 GC+SHH+1d culture CAAAAAAAAA (157) 58.5 0.0585 P8 GC+SHH+1d culture CAAATTAACC (2) 26.9 0.0269 P8 GC+SHH+1d culture CAAATTAAAA (5) 8.2 0.0082 P8 GC+SHH+1d culture TGTCTATTTG (2) 7 0.007 P8 GC+SHH+1d culture TAAGACCTTA (5) 2.3 0.0023 P8 GC+SHH+1d culture AGTTGGGAAG (3) 1.2 0.0012 3T3 fibroblasts CAAATTAACC (2) 7 0.007 3T3 fibroblasts GGCAGTCCTG (3) 3.5 0.0035 3T3 fibroblasts TCCTCTGGGG (4) 3.5 0.0035 E15 cortex CAAAAAAAAA (157) 34.6 0.0346 E15 cortex CAAATTAACC (2) 9.9 0.0099 E15 cortex TAGGCCAGAA (2) 9.9 0.0099 P1 cortex CAAAAAAAAA (157) 22.7 0.0227 P1 cortex CAAATTAAAA (5) 4.5 0.0045 Hypothalamus CAAAAAAAAA (157) 39.8 0.0398 Hypothalamus TAAGACCTTA (5) 5.4 0.0054 Hypothalamus AAAAATGTAG (4) 3.6 0.0036 Hypothalamus AAAATGTGAA 3.6 0.0036 Hypothalamus CAAATTAACC (2) 3.6 0.0036 E12.5 retina CAAAAAAAAA (157) 22.5 0.0225 E12.5 retina CAAATTAACC (2) 22.5 0.0225 E12.5 retina TGTCTATTTG (2) 9.4 0.0094 E12.5 retina CAAATTAAAA (5) 5.6 0.0056 E12.5 retina GGCAGTCCTG (3) 1.9 0.0019 E12.5 retina TCCTCTGGGG (4) 1.9 0.0019 E14.5 retina CAAATTAACC (2) 21.9 0.0219 E14.5 retina CAAAAAAAAA (157) 9.1 0.0091 E14.5 retina CAAATTAAAA (5) 7.3 0.0073 E14.5 retina AAAAATGTAG (4) 3.6 0.0036 E14.5 retina TAAGACCTTA (5) 3.6 0.0036 E14.5 retina TGTCTATTTG (2) 3.6 0.0036 E14.5 retina AGTTGGGAAG (3) 1.8 0.0018 E14.5 retina GGCAGTCCTG (3) 1.8 0.0018 E14.5 retina GGGAAGAAAG (4) 1.8 0.0018 E14.5 retina TCCTCTGGGG (4) 1.8 0.0018 E16.5 retina CAAATTAACC (2) 30.8 0.0308 E16.5 retina CAAAAAAAAA (157) 9.1 0.0091 E16.5 retina TGTCTATTTG (2) 9.1 0.0091 E16.5 retina AGTTGGGAAG (3) 5.4 0.0054 E16.5 retina CAAATTAAAA (5) 5.4 0.0054 E16.5 retina AAAAATGTAG (4) 1.8 0.0018 E16.5 retina TAAGACCTTA (5) 1.8 0.0018 E18.5 retina CAAAAAAAAA (157) 41.8 0.0418 E18.5 retina CAAATTAACC (2) 34.6 0.0346 E18.5 retina CAAATTAAAA (5) 16.4 0.0164 E18.5 retina TGTCTATTTG (2) 9.1 0.0091 E18.5 retina AAAAATGTAG (4) 1.8 0.0018 E18.5 retina TAAGACCTTA (5) 1.8 0.0018 P0.5 retina CAAAAAAAAA (157) 137.4 0.1374 P0.5 retina TGTCTATTTG (2) 9.8 0.0098 P0.5 retina CAAATTAAAA (5) 7.9 0.0079 P0.5 retina CAAATTAACC (2) 7.9 0.0079 P0.5 retina TCCTCTGGGG (4) 3.9 0.0039 P0.5 retina GGCAGTCCTG (3) 2 0.002 P0.5 retina GGGAAGAAAG (4) 2 0.002 P0.5 retina TAAGACCTTA (5) 2 0.002 P2.5 retina CAAAAAAAAA (157) 52.8 0.0528 P2.5 retina CAAATTAACC (2) 24.6 0.0246 P2.5 retina CAAATTAAAA (5) 10.6 0.0106 P2.5 retina TGTCTATTTG (2) 7 0.007 P2.5 retina TAGGCCAGAA (2) 3.5 0.0035 P4.5 retina CAAAAAAAAA (157) 41.6 0.0416 P4.5 retina CAAATTAACC (2) 15.9 0.0159 P4.5 retina TGTCTATTTG (2) 7.9 0.0079 P4.5 retina TAAGACCTTA (5) 5.9 0.0059 P4.5 retina CAAATTAAAA (5) 4 0.004 P6.5 retina CAAAAAAAAA (157) 31.7 0.0317 P6.5 retina AGTTGGGAAG (3) 5 0.005 P6.5 retina CAAATTAAAA (5) 1.7 0.0017 P6.5 retina CAAATTAACC (2) 1.7 0.0017 P10.5 crx- retina CAAAAAAAAA (157) 13 0.013 P10.5 crx- retina TAAGACCTTA (5) 1.9 0.0019 P10.5 crx- retina TGTCTATTTG (2) 1.9 0.0019 P10.5 crx+ retina CAAAAAAAAA (157) 32.7 0.0327 P10.5 crx+ retina GGGAAGAAAG (4) 3.8 0.0038 P10.5 crx+ retina CAAATTAACC (2) 1.9 0.0019 Adult retinal CAAAAAAAAA (157) 20.4 0.0204 Adult retinal CAAATTAACC (2) 3.7 0.0037 Adult retinal TAAGACCTTA (5) 3.7 0.0037 Adult retinal TCCTCTGGGG (4) 1.9 0.0019 ONL CAAAAAAAAA (157) 17.2 0.0172 ONL TAAGACCTTA (5) 3.8 0.0038 ONL AAAAATGTAG (4) 1.9 0.0019 ONL CAAATTAAAA (5) 1.9 0.0019