Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.116714	Loxl2	lysyl oxidase-like 2	14		94352
Gene Ontology	copper ion binding | nucleic acid binding | oxidoreductase activity | protein-lysine 6-oxidase activity
Human Homolog	LOXL2[lysyl oxidase-like 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 94 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGGTTGCTGG (369) 68.5 0.0685 P8 Cb GC TAATAAATAA (12) 19.6 0.0196 P8 Cb GC CCTGTAATCC (34) 6.5 0.0065 Cb medulloblastoma TGGTTGCTGG (369) 113.3 0.1133 Cb medulloblastoma CCTGTAATCC (34) 11.6 0.0116 Cb medulloblastoma TAATAAATAA (12) 6.9 0.0069 Cb medulloblastoma GTGCTCACAA (5) 2.3 0.0023 P8 GC+1d culture TGGTTGCTGG (369) 57.1 0.0571 P8 GC+1d culture TAATAAATAA (12) 32 0.032 P8 GC+1d culture CCTGTAATCC (34) 1.1 0.0011 P8 GC+1d culture GTTCGCTTTC (2) 1.1 0.0011 P8 GC+1d culture TGGTGGCTGG (6) 1.1 0.0011 P8 GC+SHH+1d culture TGGTTGCTGG (369) 89 0.089 P8 GC+SHH+1d culture TAATAAATAA (12) 32.8 0.0328 P8 GC+SHH+1d culture CCTGTAATCC (34) 4.7 0.0047 P8 GC+SHH+1d culture GTGCTCACAA (5) 3.5 0.0035 P8 GC+SHH+1d culture CTGAGGCAGG (4) 1.2 0.0012 P8 GC+SHH+1d culture GTTCGCTTTC (2) 1.2 0.0012 3T3 fibroblasts TGGTTGCTGG (369) 220.8 0.2208 3T3 fibroblasts CCTGTAATCC (34) 10.5 0.0105 E15 cortex TGGTTGCTGG (369) 277.1 0.2771 E15 cortex TGGTGGCTGG (6) 9.9 0.0099 E15 cortex CCTGTAATCC (34) 4.9 0.0049 P1 cortex TGGTTGCTGG (369) 86.4 0.0864 P1 cortex CCTGTAATCC (34) 13.6 0.0136 Hypothalamus TGGTTGCTGG (369) 349.6 0.3496 Hypothalamus TAATAAATAA (12) 43.5 0.0435 Hypothalamus CCTGTAATCC (34) 5.4 0.0054 Hypothalamus CTGAGGCAGG (4) 1.8 0.0018 Hypothalamus GTGCTCACAA (5) 1.8 0.0018 Hypothalamus TGGTGGCTGG (6) 1.8 0.0018 E12.5 retina TGGTTGCTGG (369) 157.7 0.1577 E12.5 retina TAATAAATAA (12) 39.4 0.0394 E12.5 retina TGGTGGCTGG (6) 5.6 0.0056 E12.5 retina CCTGTAATCC (34) 3.8 0.0038 E14.5 retina TGGTTGCTGG (369) 936.5 0.9365 E14.5 retina TAATAAATAA (12) 60.1 0.0601 E14.5 retina CCTGTAATCC (34) 5.5 0.0055 E14.5 retina GTGCTCACAA (5) 3.6 0.0036 E14.5 retina TGGTGGCTGG (6) 3.6 0.0036 E14.5 retina AGTGGAGTGA (5) 1.8 0.0018 E14.5 retina CTGAGGCAGG (4) 1.8 0.0018 E16.5 retina TGGTTGCTGG (369) 767.9 0.7679 E16.5 retina TAATAAATAA (12) 36.2 0.0362 E16.5 retina TGGTGGCTGG (6) 10.9 0.0109 E16.5 retina CCTGTAATCC (34) 3.6 0.0036 E16.5 retina GTGCTCACAA (5) 3.6 0.0036 E16.5 retina CCTGGGCCAG (5) 1.8 0.0018 E18.5 retina TGGTTGCTGG (369) 252.8 0.2528 E18.5 retina TAATAAATAA (12) 92.8 0.0928 E18.5 retina CCTGTAATCC (34) 1.8 0.0018 P0.5 retina TGGTTGCTGG (369) 190.4 0.1904 P0.5 retina TAATAAATAA (12) 27.5 0.0275 P0.5 retina CCTGTAATCC (34) 3.9 0.0039 P0.5 retina CTGAGGCAGG (4) 2 0.002 P0.5 retina GTGCTCACAA (5) 2 0.002 P2.5 retina TGGTTGCTGG (369) 165.4 0.1654 P2.5 retina TAATAAATAA (12) 72.2 0.0722 P2.5 retina CCTGGGCCAG (5) 3.5 0.0035 P2.5 retina CCTGTAATCC (34) 3.5 0.0035 P2.5 retina TGGTGGCTGG (6) 1.8 0.0018 P4.5 retina TGGTTGCTGG (369) 150.6 0.1506 P4.5 retina TAATAAATAA (12) 77.3 0.0773 P4.5 retina CCTGTAATCC (34) 5.9 0.0059 P4.5 retina AGTGGAGTGA (5) 2 0.002 P4.5 retina TGGTGGCTGG (6) 2 0.002 P6.5 retina TGGTTGCTGG (369) 156.7 0.1567 P6.5 retina TAATAAATAA (12) 68.4 0.0684 P6.5 retina CTGAGGCAGG (4) 3.3 0.0033 P6.5 retina CCTGGGCCAG (5) 1.7 0.0017 P6.5 retina CCTGTAATCC (34) 1.7 0.0017 P6.5 retina TGGTGGCTGG (6) 1.7 0.0017 P10.5 crx- retina TGGTTGCTGG (369) 280.5 0.2805 P10.5 crx- retina TAATAAATAA (12) 11.1 0.0111 P10.5 crx- retina CCTGTAATCC (34) 3.7 0.0037 P10.5 crx- retina AGTGGAGTGA (5) 1.9 0.0019 P10.5 crx- retina CCTGGGCCAG (5) 1.9 0.0019 P10.5 crx+ retina TGGTTGCTGG (369) 101.9 0.1019 P10.5 crx+ retina TAATAAATAA (12) 15.4 0.0154 P10.5 crx+ retina CCTGGGCCAG (5) 5.8 0.0058 P10.5 crx+ retina CCTGTAATCC (34) 3.8 0.0038 P10.5 crx+ retina GTGCTCACAA (5) 1.9 0.0019 P10.5 crx+ retina TGGTGGCTGG (6) 1.9 0.0019 Adult retinal TGGTTGCTGG (369) 214.8 0.2148 Adult retinal TAATAAATAA (12) 5.6 0.0056 Adult retinal CCTGTAATCC (34) 3.7 0.0037 Adult retinal GTGCTCACAA (5) 3.7 0.0037 Adult retinal CTGAGGCAGG (4) 1.9 0.0019 Adult retinal TGGTGGCTGG (6) 1.9 0.0019 ONL TGGTTGCTGG (369) 398.4 0.3984 ONL TAATAAATAA (12) 23 0.023 ONL CCTGTAATCC (34) 3.8 0.0038 ONL GTGCTCACAA (5) 3.8 0.0038 ONL TGGTGGCTGG (6) 1.9 0.0019