Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.117709	1110001A05Rik	RIKEN cDNA 1110001A05 gene	3		56376
Gene Ontology	biological_process unknown | protein binding | Z disc
Human Homolog	LIM[LIM protein (similar to rat protein kinase C-binding enigma)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 51 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTTATTTGGT (4) 4.9 0.0049 P8 Cb GC AAGCAACTAA (4) 3.3 0.0033 P8 Cb GC AGAAATGTAA 3.3 0.0033 P8 Cb GC TGATTTTTTT (4) 3.3 0.0033 Cb medulloblastoma AGAAATGTAA 4.6 0.0046 Cb medulloblastoma AGAACAAAAA (2) 2.3 0.0023 P8 GC+1d culture AAGCAACTAA (4) 5.7 0.0057 P8 GC+1d culture TGATTTTTTT (4) 1.1 0.0011 P8 GC+1d culture TGGCTGGGAA (4) 1.1 0.0011 P8 GC+SHH+1d culture AAGCAACTAA (4) 3.5 0.0035 P8 GC+SHH+1d culture TGGCTGGGAA (4) 1.2 0.0012 3T3 fibroblasts AAGCAACTAA (4) 7 0.007 Hypothalamus AAGCAACTAA (4) 9.1 0.0091 Hypothalamus AGAACAAAAA (2) 5.4 0.0054 Hypothalamus TGTCTGTATT (6) 3.6 0.0036 Hypothalamus TGGCTGGGAA (4) 1.8 0.0018 E12.5 retina AAGCAACTAA (4) 7.5 0.0075 E14.5 retina AGAACAAAAA (2) 1.8 0.0018 E14.5 retina ATCCATCTGT (4) 1.8 0.0018 E14.5 retina CTTATTTGGT (4) 1.8 0.0018 E14.5 retina TGATTTTTTT (4) 1.8 0.0018 E16.5 retina AGAAATGTAA 1.8 0.0018 E16.5 retina ATCCATCTGT (4) 1.8 0.0018 E18.5 retina AAGCAACTAA (4) 7.3 0.0073 E18.5 retina AGAACAAAAA (2) 1.8 0.0018 E18.5 retina ATCCATCTGT (4) 1.8 0.0018 E18.5 retina TGATTTTTTT (4) 1.8 0.0018 P0.5 retina AAGCAACTAA (4) 3.9 0.0039 P0.5 retina CTTATTTGGT (4) 3.9 0.0039 P0.5 retina GGCATTTGCA (3) 2 0.002 P0.5 retina TGGCTGGGAA (4) 2 0.002 P2.5 retina AAGCAACTAA (4) 8.8 0.0088 P2.5 retina CTTATTTGGT (4) 1.8 0.0018 P4.5 retina AAGCAACTAA (4) 4 0.004 P4.5 retina AGAAATGTAA 4 0.004 P4.5 retina AGAACAAAAA (2) 2 0.002 P4.5 retina ATCCATCTGT (4) 2 0.002 P4.5 retina CTTATTTGGT (4) 2 0.002 P6.5 retina AAGCAACTAA (4) 3.3 0.0033 P6.5 retina AGAACAAAAA (2) 1.7 0.0017 P6.5 retina CTTATTTGGT (4) 1.7 0.0017 P6.5 retina TGTCTGTATT (6) 1.7 0.0017 P10.5 crx- retina AGAAATGTAA 1.9 0.0019 P10.5 crx+ retina AAGCAACTAA (4) 7.7 0.0077 P10.5 crx+ retina GGCATTTGCA (3) 1.9 0.0019 Adult retinal GGCATTTGCA (3) 7.4 0.0074 Adult retinal AGAACAAAAA (2) 3.7 0.0037 Adult retinal TGATTTTTTT (4) 1.9 0.0019 ONL AAGCAACTAA (4) 7.7 0.0077 ONL TGATTTTTTT (4) 7.7 0.0077 ONL GGATACATAA (4) 1.9 0.0019