Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.117896	Pcm1	pericentriolar material 1	8	8 22.5 cM	18536
Human Homolog	PCM1[pericentriolar material 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 105 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCCTGACTTC (5) 3.3 0.0033 P8 Cb GC GCAGTTTAAA (3) 3.3 0.0033 P8 Cb GC TTAATAACTC 3.3 0.0033 P8 Cb GC AGCTGCAGCT (2) 1.6 0.0016 P8 Cb GC ATTTATTAAA (8) 1.6 0.0016 P8 Cb GC GCCACAGGAG (2) 1.6 0.0016 P8 Cb GC TCAATTTAAA (3) 1.6 0.0016 Cb medulloblastoma CCCTGACTTC (5) 16.2 0.0162 Cb medulloblastoma AGCTGCAGCT (2) 4.6 0.0046 Cb medulloblastoma CAACCGTGTA 4.6 0.0046 Cb medulloblastoma GCAGTTTAAA (3) 4.6 0.0046 Cb medulloblastoma GGGGAAGATG (2) 2.3 0.0023 Cb medulloblastoma TCAATTTAAA (3) 2.3 0.0023 P8 GC+1d culture GGGGAAGATG (2) 8 0.008 P8 GC+1d culture GCAGTTTAAA (3) 6.8 0.0068 P8 GC+1d culture CCCTGACTTC (5) 3.4 0.0034 P8 GC+1d culture ATTTATTAAA (8) 2.3 0.0023 P8 GC+1d culture CATACAGTGG (4) 2.3 0.0023 P8 GC+1d culture TTCTAAGAAC (4) 1.1 0.0011 P8 GC+SHH+1d culture GGGGAAGATG (2) 14.1 0.0141 P8 GC+SHH+1d culture GCAGTTTAAA (3) 8.2 0.0082 P8 GC+SHH+1d culture CCCTGACTTC (5) 4.7 0.0047 P8 GC+SHH+1d culture ATTTATTAAA (8) 1.2 0.0012 3T3 fibroblasts CCCTGACTTC (5) 3.5 0.0035 3T3 fibroblasts GGGGAAGATG (2) 3.5 0.0035 E15 cortex CCCTGACTTC (5) 4.9 0.0049 E15 cortex GGGGAAGATG (2) 4.9 0.0049 P1 cortex CCCTGACTTC (5) 18.2 0.0182 P1 cortex ATTTATTAAA (8) 4.5 0.0045 P1 cortex GCAGTTTAAA (3) 4.5 0.0045 Hypothalamus GGGGAAGATG (2) 23.5 0.0235 Hypothalamus CCCTGACTTC (5) 9.1 0.0091 Hypothalamus ATTTATTAAA (8) 3.6 0.0036 Hypothalamus CAACCGTGTA 1.8 0.0018 Hypothalamus CATACAGTGG (4) 1.8 0.0018 Hypothalamus TTCCCAATCT 1.8 0.0018 E12.5 retina GCAGTTTAAA (3) 11.3 0.0113 E12.5 retina CAACCGTGTA 3.8 0.0038 E12.5 retina GGGGAAGATG (2) 3.8 0.0038 E12.5 retina CCCTGACTTC (5) 1.9 0.0019 E12.5 retina TTCTAAGAAC (4) 1.9 0.0019 E14.5 retina CCCTGACTTC (5) 7.3 0.0073 E14.5 retina GCAGTTTAAA (3) 5.5 0.0055 E14.5 retina GAGAAGATGA (4) 3.6 0.0036 E16.5 retina CAACCGTGTA 3.6 0.0036 E16.5 retina GCAGTTTAAA (3) 3.6 0.0036 E16.5 retina TTCCCAATCT 3.6 0.0036 E16.5 retina ATTACGCCAA (233) 1.8 0.0018 E16.5 retina ATTTATTAAA (8) 1.8 0.0018 E16.5 retina CCCTGACTTC (5) 1.8 0.0018 E16.5 retina GAGAAGATGA (4) 1.8 0.0018 E16.5 retina GCCACAGGAG (2) 1.8 0.0018 E18.5 retina ATTTATTAAA (8) 3.6 0.0036 E18.5 retina GCAGTTTAAA (3) 3.6 0.0036 E18.5 retina GGGGAAGATG (2) 3.6 0.0036 E18.5 retina CCCTGACTTC (5) 1.8 0.0018 E18.5 retina GAGAAGATGA (4) 1.8 0.0018 E18.5 retina GCCACAGGAG (2) 1.8 0.0018 E18.5 retina TTCCCAATCT 1.8 0.0018 P0.5 retina CCCTGACTTC (5) 9.8 0.0098 P0.5 retina GGGGAAGATG (2) 3.9 0.0039 P0.5 retina ATTACGCCAA (233) 2 0.002 P0.5 retina CAACCGTGTA 2 0.002 P0.5 retina CATACAGTGG (4) 2 0.002 P2.5 retina GGGGAAGATG (2) 10.6 0.0106 P2.5 retina CCCTGACTTC (5) 8.8 0.0088 P2.5 retina CAACCGTGTA 1.8 0.0018 P2.5 retina TTCCCAATCT 1.8 0.0018 P4.5 retina CCCTGACTTC (5) 4 0.004 P4.5 retina GCAGTTTAAA (3) 4 0.004 P4.5 retina GCCACAGGAG (2) 2 0.002 P4.5 retina GGGGAAGATG (2) 2 0.002 P4.5 retina TCAATTTAAA (3) 2 0.002 P4.5 retina TTCTAAGAAC (4) 2 0.002 P6.5 retina GGGGAAGATG (2) 10 0.01 P6.5 retina CCCTGACTTC (5) 5 0.005 P6.5 retina TTCTAAGAAC (4) 3.3 0.0033 P6.5 retina ATTTATTAAA (8) 1.7 0.0017 P6.5 retina CAACCGTGTA 1.7 0.0017 P6.5 retina GCAGTTTAAA (3) 1.7 0.0017 P6.5 retina TCAATTTAAA (3) 1.7 0.0017 P10.5 crx- retina GCAGTTTAAA (3) 5.6 0.0056 P10.5 crx- retina ACAGTGTGGA (2) 1.9 0.0019 P10.5 crx- retina CCCTGACTTC (5) 1.9 0.0019 P10.5 crx- retina GGGGAAGATG (2) 1.9 0.0019 P10.5 crx+ retina GCAGTTTAAA (3) 11.5 0.0115 P10.5 crx+ retina CCCTGACTTC (5) 5.8 0.0058 P10.5 crx+ retina GGGGAAGATG (2) 3.8 0.0038 P10.5 crx+ retina ACAGTGTGGA (2) 1.9 0.0019 P10.5 crx+ retina GAGAAGATGA (4) 1.9 0.0019 P10.5 crx+ retina GCCACAGGAG (2) 1.9 0.0019 P10.5 crx+ retina TCAATTTAAA (3) 1.9 0.0019 P10.5 crx+ retina TTGTTTCTTC (5) 1.9 0.0019 Adult retinal CAACCGTGTA 9.3 0.0093 Adult retinal CCCTGACTTC (5) 9.3 0.0093 Adult retinal GGGGAAGATG (2) 5.6 0.0056 Adult retinal ATTACGCCAA (233) 3.7 0.0037 Adult retinal ACAGTGTGGA (2) 1.9 0.0019 Adult retinal TTAATAACTC 1.9 0.0019 Adult retinal TTGTTTCTTC (5) 1.9 0.0019 ONL GGGGAAGATG (2) 9.6 0.0096 ONL GCAGTTTAAA (3) 3.8 0.0038 ONL ATTTATTAAA (8) 1.9 0.0019 ONL CAACCGTGTA 1.9 0.0019 ONL CCCTGACTTC (5) 1.9 0.0019