Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.119387
BC017647
cDNA sequence BC017647
11
216971
Mm.119387
9630020I17Rik
RIKEN cDNA 9630020I17 gene
11
319557
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 39 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CCCCTTCCCA (
7
)
6.5
0.0065
P8 Cb GC
CCCCTCCCCA (
6
)
3.3
0.0033
P8 Cb GC
AAGAAAACCA (
8
)
1.6
0.0016
P8 Cb GC
GTGGGCAGCC
(
5
)
1.6
0.0016
Cb medulloblastoma
CCCCTTCCCA (
7
)
18.5
0.0185
Cb medulloblastoma
CCCCTCCCCA (
6
)
16.2
0.0162
Cb medulloblastoma
GCAACTGTCA (
4
)
4.6
0.0046
P8 GC+1d culture
CCCCTTCCCA (
7
)
9.1
0.0091
P8 GC+1d culture
CCCCTCCCCA (
6
)
5.7
0.0057
P8 GC+SHH+1d culture
CCCCTTCCCA (
7
)
11.7
0.0117
P8 GC+SHH+1d culture
AAGAAAACCA (
8
)
2.3
0.0023
P8 GC+SHH+1d culture
CCCCTCCCCA (
6
)
1.2
0.0012
P8 GC+SHH+1d culture
GTGGAATTTT
(
4
)
1.2
0.0012
P8 GC+SHH+1d culture
GTGGGCAGCC
(
5
)
1.2
0.0012
P8 GC+SHH+1d culture
TTGAGCAAAG
(
4
)
1.2
0.0012
3T3 fibroblasts
GTGGGCAGCC
(
5
)
3.5
0.0035
E15 cortex
TTGAGCAAAG
(
4
)
4.9
0.0049
P1 cortex
CCCCTTCCCA (
7
)
4.5
0.0045
P1 cortex
TTGAGCAAAG
(
4
)
4.5
0.0045
Hypothalamus
CCCCTTCCCA (
7
)
3.6
0.0036
Hypothalamus
AAGAAAACCA (
8
)
1.8
0.0018
Hypothalamus
GCAACTGTCA (
4
)
1.8
0.0018
E12.5 retina
CCCCTTCCCA (
7
)
1.9
0.0019
E18.5 retina
CCCCTTCCCA (
7
)
3.6
0.0036
E18.5 retina
GTGGAATTTT
(
4
)
3.6
0.0036
P0.5 retina
GTGGGCAGCC
(
5
)
2
0.002
P2.5 retina
AAGAAAACCA (
8
)
1.8
0.0018
P2.5 retina
CCCCTTCCCA (
7
)
1.8
0.0018
P4.5 retina
CCCCTTCCCA (
7
)
5.9
0.0059
P4.5 retina
GCAACTGTCA (
4
)
2
0.002
P6.5 retina
CCCCTTCCCA (
7
)
6.7
0.0067
P6.5 retina
TTGAGCAAAG
(
4
)
5
0.005
P6.5 retina
CCCCTCCCCA (
6
)
1.7
0.0017
P10.5 crx- retina
CCCCTCCCCA (
6
)
1.9
0.0019
P10.5 crx+ retina
CCCCTCCCCA (
6
)
7.7
0.0077
P10.5 crx+ retina
CCCCTTCCCA (
7
)
1.9
0.0019
Adult retinal
CCCCTTCCCA (
7
)
7.4
0.0074
Adult retinal
TTGAGCAAAG
(
4
)
1.9
0.0019
ONL
CCCCTCCCCA (
6
)
1.9
0.0019
