Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.119479	Gga3	golgi associated, gamma adaptin ear containing, ARF binding protein 3	11		260302
Gene Ontology	ADP-ribosylation factor binding | biological_process unknown | Golgi trans face
Human Homolog	GGA3[golgi associated, gamma adaptin ear containing, ARF binding protein 3]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 104 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGGTTGCTGG (369) 68.5 0.0685 P8 Cb GC GTGAAGGAAG (8) 4.9 0.0049 P8 Cb GC GAGTCCTGGC (9) 1.6 0.0016 P8 Cb GC TGAAATAAAA (9) 1.6 0.0016 Cb medulloblastoma TGGTTGCTGG (369) 113.3 0.1133 Cb medulloblastoma TGAAATAAAA (9) 11.6 0.0116 Cb medulloblastoma AAATAAACTG (5) 2.3 0.0023 Cb medulloblastoma GTGAAGGAAG (8) 2.3 0.0023 P8 GC+1d culture TGGTTGCTGG (369) 57.1 0.0571 P8 GC+1d culture AAATAAACTG (5) 4.6 0.0046 P8 GC+1d culture GTGAAGGAAG (8) 3.4 0.0034 P8 GC+1d culture TGAAATAAAA (9) 3.4 0.0034 P8 GC+1d culture GAGTCCTGGC (9) 2.3 0.0023 P8 GC+1d culture CGCGCACACA (11) 1.1 0.0011 P8 GC+1d culture TGCCCCTGCA 1.1 0.0011 P8 GC+SHH+1d culture TGGTTGCTGG (369) 89 0.089 P8 GC+SHH+1d culture AAATAAACTG (5) 4.7 0.0047 P8 GC+SHH+1d culture GAGTCCTGGC (9) 4.7 0.0047 P8 GC+SHH+1d culture GTGAAGGAAG (8) 2.3 0.0023 3T3 fibroblasts TGGTTGCTGG (369) 220.8 0.2208 3T3 fibroblasts GAGTCCTGGC (9) 7 0.007 3T3 fibroblasts CGCGCACACA (11) 3.5 0.0035 3T3 fibroblasts TGCCCCTGCA 3.5 0.0035 3T3 fibroblasts TTGGGTCTGG 3.5 0.0035 E15 cortex TGGTTGCTGG (369) 277.1 0.2771 E15 cortex GAGTCCTGGC (9) 9.9 0.0099 E15 cortex TGAAATAAAA (9) 4.9 0.0049 P1 cortex TGGTTGCTGG (369) 86.4 0.0864 P1 cortex AAATAAACTG (5) 13.6 0.0136 P1 cortex TGAAATAAAA (9) 13.6 0.0136 P1 cortex GAGTCCTGGC (9) 9.1 0.0091 P1 cortex TTGGGTCTGG 4.5 0.0045 Hypothalamus TGGTTGCTGG (369) 349.6 0.3496 Hypothalamus TGAAATAAAA (9) 12.7 0.0127 Hypothalamus CTGGCTGGCC (2) 5.4 0.0054 Hypothalamus CGCGCACACA (11) 3.6 0.0036 Hypothalamus AAATAAACTG (5) 1.8 0.0018 Hypothalamus CAGCAAAACA (2) 1.8 0.0018 Hypothalamus CCTCTTCGAG 1.8 0.0018 Hypothalamus CTGCTGGCCA (10) 1.8 0.0018 Hypothalamus GAGTCCTGGC (9) 1.8 0.0018 Hypothalamus TTGGGTCTGG 1.8 0.0018 E12.5 retina TGGTTGCTGG (369) 157.7 0.1577 E12.5 retina AAATAAACTG (5) 9.4 0.0094 E12.5 retina GAGTCCTGGC (9) 5.6 0.0056 E12.5 retina TGAAATAAAA (9) 5.6 0.0056 E12.5 retina CCTCTTCGAG 1.9 0.0019 E12.5 retina GTGAAGGAAG (8) 1.9 0.0019 E14.5 retina TGGTTGCTGG (369) 936.5 0.9365 E14.5 retina AAATAAACTG (5) 12.8 0.0128 E14.5 retina TGAAATAAAA (9) 5.5 0.0055 E14.5 retina TGCCCCTGCA 3.6 0.0036 E14.5 retina CGCGCACACA (11) 1.8 0.0018 E14.5 retina TTGGGTCTGG 1.8 0.0018 E16.5 retina TGGTTGCTGG (369) 767.9 0.7679 E16.5 retina AAATAAACTG (5) 12.7 0.0127 E16.5 retina TGAAATAAAA (9) 10.9 0.0109 E16.5 retina CTGGCTGGCC (2) 1.8 0.0018 E16.5 retina GAGTCCTGGC (9) 1.8 0.0018 E18.5 retina TGGTTGCTGG (369) 252.8 0.2528 E18.5 retina TGAAATAAAA (9) 9.1 0.0091 E18.5 retina AAATAAACTG (5) 5.5 0.0055 E18.5 retina CGCGCACACA (11) 1.8 0.0018 E18.5 retina GAGTCCTGGC (9) 1.8 0.0018 E18.5 retina TTGGGTCTGG 1.8 0.0018 P0.5 retina TGGTTGCTGG (369) 190.4 0.1904 P0.5 retina GAGTCCTGGC (9) 11.8 0.0118 P0.5 retina AAATAAACTG (5) 3.9 0.0039 P2.5 retina TGGTTGCTGG (369) 165.4 0.1654 P2.5 retina AAATAAACTG (5) 14.1 0.0141 P2.5 retina GAGTCCTGGC (9) 5.3 0.0053 P2.5 retina CAGCAAAACA (2) 1.8 0.0018 P2.5 retina CGCGCACACA (11) 1.8 0.0018 P2.5 retina CTGGCTGGCC (2) 1.8 0.0018 P2.5 retina TGAAATAAAA (9) 1.8 0.0018 P4.5 retina TGGTTGCTGG (369) 150.6 0.1506 P4.5 retina TGAAATAAAA (9) 15.9 0.0159 P4.5 retina AAATAAACTG (5) 5.9 0.0059 P4.5 retina CAGCAAAACA (2) 2 0.002 P6.5 retina TGGTTGCTGG (369) 156.7 0.1567 P6.5 retina AAATAAACTG (5) 13.3 0.0133 P6.5 retina GAGTCCTGGC (9) 6.7 0.0067 P6.5 retina TGAAATAAAA (9) 5 0.005 P6.5 retina GTGAAGGAAG (8) 3.3 0.0033 P10.5 crx- retina TGGTTGCTGG (369) 280.5 0.2805 P10.5 crx- retina AAATAAACTG (5) 7.4 0.0074 P10.5 crx- retina GAGTCCTGGC (9) 3.7 0.0037 P10.5 crx- retina TGAAATAAAA (9) 3.7 0.0037 P10.5 crx- retina GTGAAGGAAG (8) 1.9 0.0019 P10.5 crx- retina TGCCCCTGCA 1.9 0.0019 P10.5 crx+ retina TGGTTGCTGG (369) 101.9 0.1019 P10.5 crx+ retina AAATAAACTG (5) 9.6 0.0096 P10.5 crx+ retina TGAAATAAAA (9) 3.8 0.0038 P10.5 crx+ retina CTGCTGGCCA (10) 1.9 0.0019 Adult retinal TGGTTGCTGG (369) 214.8 0.2148 Adult retinal GAGTCCTGGC (9) 9.3 0.0093 Adult retinal CTGCTGGCCA (10) 3.7 0.0037 Adult retinal CTGGCTGGCC (2) 1.9 0.0019 Adult retinal TGAAATAAAA (9) 1.9 0.0019 ONL TGGTTGCTGG (369) 398.4 0.3984 ONL AAATAAACTG (5) 5.7 0.0057 ONL TGAAATAAAA (9) 3.8 0.0038 ONL CCTCTTCGAG 1.9 0.0019 ONL CTGGCTGGCC (2) 1.9 0.0019