Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.120151	BC043098	cDNA sequence BC043098	1		214469
Human Homolog	LOC130074[hypothetical protein LOC130074]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 123 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGAGGCAAG (5) 217 0.217 P8 Cb GC AAGAGGCGAG (3) 6.5 0.0065 P8 Cb GC GAACTTATGT (2) 4.9 0.0049 P8 Cb GC GGAGGCAGCA (5) 3.3 0.0033 P8 Cb GC AAGAGGGAAG (4) 1.6 0.0016 P8 Cb GC TGTGTGTATG (18) 1.6 0.0016 Cb medulloblastoma AAGAGGCAAG (5) 78.6 0.0786 Cb medulloblastoma GAACTTATGT (2) 4.6 0.0046 Cb medulloblastoma TGTGCGAGAG (3) 4.6 0.0046 Cb medulloblastoma TAGTAGAATA (3) 2.3 0.0023 Cb medulloblastoma TTGGTGTAGA 2.3 0.0023 Cb medulloblastoma TTTATAAACA (2) 2.3 0.0023 P8 GC+1d culture AAGAGGCAAG (5) 149.5 0.1495 P8 GC+1d culture GAACTTATGT (2) 9.1 0.0091 P8 GC+1d culture GTGTTCCTGG (6) 2.3 0.0023 P8 GC+1d culture TGTGTGTATG (18) 2.3 0.0023 P8 GC+1d culture AAGAGGCGAG (3) 1.1 0.0011 P8 GC+1d culture AGCTGGGAGA (4) 1.1 0.0011 P8 GC+1d culture AGCTGTGAGG (2) 1.1 0.0011 P8 GC+1d culture GCAGTGTGGG 1.1 0.0011 P8 GC+1d culture GGAGGCAGCA (5) 1.1 0.0011 P8 GC+1d culture GTTGCTGGGA (3) 1.1 0.0011 P8 GC+1d culture TGTGCGAGAG (3) 1.1 0.0011 P8 GC+SHH+1d culture AAGAGGCAAG (5) 134.7 0.1347 P8 GC+SHH+1d culture GAACTTATGT (2) 8.2 0.0082 P8 GC+SHH+1d culture GTGTTCCTGG (6) 3.5 0.0035 P8 GC+SHH+1d culture TTTATAAAAA (6) 3.5 0.0035 P8 GC+SHH+1d culture AAGAGGGAAG (4) 2.3 0.0023 P8 GC+SHH+1d culture TAGTAGAATA (3) 2.3 0.0023 P8 GC+SHH+1d culture TGTGCGAGAG (3) 2.3 0.0023 P8 GC+SHH+1d culture GCAGTGTGGG 1.2 0.0012 P8 GC+SHH+1d culture GTTGCTGGGA (3) 1.2 0.0012 P8 GC+SHH+1d culture TTGGTGTAGA 1.2 0.0012 3T3 fibroblasts AAGAGGCAAG (5) 59.6 0.0596 3T3 fibroblasts AGCTGTGAGG (2) 3.5 0.0035 3T3 fibroblasts GAACTTATGT (2) 3.5 0.0035 3T3 fibroblasts GTGTTCCTGG (6) 3.5 0.0035 E15 cortex AAGAGGCAAG (5) 34.6 0.0346 E15 cortex GAACTTATGT (2) 9.9 0.0099 E15 cortex GTTGCTGGGA (3) 9.9 0.0099 E15 cortex TGTGCGAGAG (3) 4.9 0.0049 P1 cortex AAGAGGCAAG (5) 13.6 0.0136 P1 cortex GAACTTATGT (2) 4.5 0.0045 P1 cortex GTTGCTGGGA (3) 4.5 0.0045 P1 cortex TTTATAAACA (2) 4.5 0.0045 Hypothalamus AAGAGGCAAG (5) 56.1 0.0561 Hypothalamus TAGTAGAATA (3) 3.6 0.0036 Hypothalamus TTGGTGTAGA 3.6 0.0036 Hypothalamus GAACTTATGT (2) 1.8 0.0018 Hypothalamus GCAGTGTGGG 1.8 0.0018 Hypothalamus GGAGGCAGCA (5) 1.8 0.0018 Hypothalamus GTGTTCCTGG (6) 1.8 0.0018 Hypothalamus GTTGCTGGGA (3) 1.8 0.0018 Hypothalamus TGTGTGTATG (18) 1.8 0.0018 Hypothalamus TTTATAAAAA (6) 1.8 0.0018 E12.5 retina AAGAGGCAAG (5) 341.7 0.3417 E12.5 retina GAACTTATGT (2) 9.4 0.0094 E12.5 retina AAGAGGGAAG (4) 3.8 0.0038 E12.5 retina GTGTTCCTGG (6) 3.8 0.0038 E12.5 retina TGTGCGAGAG (3) 3.8 0.0038 E12.5 retina GTTGCTGGGA (3) 1.9 0.0019 E14.5 retina AAGAGGCAAG (5) 147.6 0.1476 E14.5 retina AAGAGGGAAG (4) 5.5 0.0055 E14.5 retina GAACTTATGT (2) 1.8 0.0018 E14.5 retina GGAGGCAGCA (5) 1.8 0.0018 E14.5 retina GTGTTCCTGG (6) 1.8 0.0018 E14.5 retina GTTGCTGGGA (3) 1.8 0.0018 E14.5 retina TGTGCGAGAG (3) 1.8 0.0018 E16.5 retina AAGAGGCAAG (5) 128.6 0.1286 E16.5 retina GAACTTATGT (2) 3.6 0.0036 E16.5 retina TGTGTGTATG (18) 3.6 0.0036 E16.5 retina GTGTTCCTGG (6) 1.8 0.0018 E16.5 retina TGTGCGAGAG (3) 1.8 0.0018 E18.5 retina AAGAGGCAAG (5) 223.7 0.2237 E18.5 retina GAACTTATGT (2) 5.5 0.0055 E18.5 retina AGCTGGGAGA (4) 1.8 0.0018 E18.5 retina GTTGCTGGGA (3) 1.8 0.0018 E18.5 retina TGTGTGTATG (18) 1.8 0.0018 P0.5 retina AAGAGGCAAG (5) 155 0.155 P0.5 retina GAACTTATGT (2) 13.7 0.0137 P0.5 retina TGTGCGAGAG (3) 5.9 0.0059 P0.5 retina AAGAGGGAAG (4) 3.9 0.0039 P0.5 retina GCAGTGTGGG 2 0.002 P2.5 retina AAGAGGCAAG (5) 121.4 0.1214 P2.5 retina GAACTTATGT (2) 7 0.007 P2.5 retina AAGAGGGAAG (4) 5.3 0.0053 P2.5 retina TGTGCGAGAG (3) 5.3 0.0053 P2.5 retina GTTGCTGGGA (3) 1.8 0.0018 P2.5 retina TAGTAGAATA (3) 1.8 0.0018 P2.5 retina TTTATAAAAA (6) 1.8 0.0018 P2.5 retina TTTATAAACA (2) 1.8 0.0018 P4.5 retina AAGAGGCAAG (5) 83.2 0.0832 P4.5 retina GAACTTATGT (2) 7.9 0.0079 P4.5 retina AAGAGGGAAG (4) 2 0.002 P4.5 retina GCAGTGTGGG 2 0.002 P4.5 retina TAGTAGAATA (3) 2 0.002 P6.5 retina AAGAGGCAAG (5) 83.4 0.0834 P6.5 retina GAACTTATGT (2) 8.3 0.0083 P6.5 retina TGTGCGAGAG (3) 3.3 0.0033 P6.5 retina GCAGTGTGGG 1.7 0.0017 P6.5 retina GTGTTCCTGG (6) 1.7 0.0017 P6.5 retina TAGTAGAATA (3) 1.7 0.0017 P6.5 retina TTTATAAAAA (6) 1.7 0.0017 P10.5 crx- retina AAGAGGCAAG (5) 102.2 0.1022 P10.5 crx- retina TGTGCGAGAG (3) 7.4 0.0074 P10.5 crx- retina GAACTTATGT (2) 3.7 0.0037 P10.5 crx- retina AAGAGGCGAG (3) 1.9 0.0019 P10.5 crx- retina TAGTAGAATA (3) 1.9 0.0019 P10.5 crx+ retina AAGAGGCAAG (5) 86.5 0.0865 P10.5 crx+ retina TGTGCGAGAG (3) 5.8 0.0058 P10.5 crx+ retina GAACTTATGT (2) 3.8 0.0038 P10.5 crx+ retina AGCTGTGAGG (2) 1.9 0.0019 P10.5 crx+ retina GCAGTGTGGG 1.9 0.0019 Adult retinal AAGAGGCAAG (5) 33.3 0.0333 Adult retinal GAACTTATGT (2) 1.9 0.0019 Adult retinal GCAGTGTGGG 1.9 0.0019 ONL AAGAGGCAAG (5) 47.9 0.0479 ONL GCAGTGTGGG 5.7 0.0057 ONL TTTATAAAAA (6) 5.7 0.0057 ONL GAACTTATGT (2) 3.8 0.0038 ONL TGTGCGAGAG (3) 3.8 0.0038 ONL AGCTGGGAGA (4) 1.9 0.0019 ONL TGTGTGTATG (18) 1.9 0.0019