Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.122430	6130401J04Rik	RIKEN cDNA 6130401J04 gene	1		66799
Gene Ontology	ligase activity | protein modification | ubiquitin conjugating enzyme activity | ubiquitin cycle
Human Homolog	FLJ11011[hypothetical protein FLJ11011]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 83 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTTTATTTGT (7) 8.2 0.0082 P8 Cb GC CATCTTTAAA (2) 4.9 0.0049 P8 Cb GC AGCCCTATTG (3) 1.6 0.0016 P8 Cb GC GGCCTCTTCT (3) 1.6 0.0016 Cb medulloblastoma CATCTTTAAA (2) 16.2 0.0162 Cb medulloblastoma GGCCTCTTCT (3) 4.6 0.0046 Cb medulloblastoma AGCCCTATTG (3) 2.3 0.0023 Cb medulloblastoma TTTGCTCTGG (5) 2.3 0.0023 P8 GC+1d culture TTTTATTTGT (7) 6.8 0.0068 P8 GC+1d culture TTTGCTCTGG (5) 4.6 0.0046 P8 GC+1d culture AGCCCTATTG (3) 2.3 0.0023 P8 GC+1d culture CATCTTTAAA (2) 1.1 0.0011 P8 GC+1d culture CTGTTGGGCT (2) 1.1 0.0011 P8 GC+1d culture CTTTTTTATT (4) 1.1 0.0011 P8 GC+1d culture GAAAGTTTTC 1.1 0.0011 P8 GC+1d culture GTGTAGGGCT (8) 1.1 0.0011 P8 GC+SHH+1d culture TTTTATTTGT (7) 7 0.007 P8 GC+SHH+1d culture AGCCCTATTG (3) 2.3 0.0023 P8 GC+SHH+1d culture CATCTTTAAA (2) 2.3 0.0023 P8 GC+SHH+1d culture GGCCTCTTCT (3) 1.2 0.0012 P8 GC+SHH+1d culture TTTGCTCTGG (5) 1.2 0.0012 3T3 fibroblasts GGCCTCTTCT (3) 17.5 0.0175 3T3 fibroblasts AGCCCTATTG (3) 3.5 0.0035 E15 cortex GGCCTCTTCT (3) 29.7 0.0297 P1 cortex CTTTTTTATT (4) 4.5 0.0045 Hypothalamus CATCTTTAAA (2) 14.5 0.0145 Hypothalamus TTTTATTTGT (7) 5.4 0.0054 Hypothalamus GAAAGTTTTC 1.8 0.0018 Hypothalamus GGCCTCTTCT (3) 1.8 0.0018 E12.5 retina TTTTATTTGT (7) 9.4 0.0094 E12.5 retina GAAAGTTTTC 1.9 0.0019 E12.5 retina TTTGCTCTGG (5) 1.9 0.0019 E14.5 retina TTTTATTTGT (7) 21.9 0.0219 E14.5 retina CATCTTTAAA (2) 3.6 0.0036 E14.5 retina TTTGCTCTGG (5) 3.6 0.0036 E14.5 retina GCCTGTGCAT (7) 1.8 0.0018 E14.5 retina GGCCTCTTCT (3) 1.8 0.0018 E14.5 retina TGATCGCTGG (2) 1.8 0.0018 E16.5 retina TTTTATTTGT (7) 14.5 0.0145 E16.5 retina CATCTTTAAA (2) 3.6 0.0036 E16.5 retina TGATCGCTGG (2) 3.6 0.0036 E16.5 retina AGCCCTATTG (3) 1.8 0.0018 E16.5 retina CTGTTGGGCT (2) 1.8 0.0018 E16.5 retina GAAAGTTTTC 1.8 0.0018 E16.5 retina GTGTAGGGCT (8) 1.8 0.0018 E16.5 retina TTTGCTCTGG (5) 1.8 0.0018 E18.5 retina TTTTATTTGT (7) 12.7 0.0127 E18.5 retina CATCTTTAAA (2) 3.6 0.0036 E18.5 retina GGCCTCTTCT (3) 1.8 0.0018 E18.5 retina TCTCAAACAA (4) 1.8 0.0018 P0.5 retina TTTTATTTGT (7) 9.8 0.0098 P0.5 retina GCCTGTGCAT (7) 3.9 0.0039 P0.5 retina GGCCTCTTCT (3) 3.9 0.0039 P0.5 retina AGCCCTATTG (3) 2 0.002 P2.5 retina TTTTATTTGT (7) 12.3 0.0123 P2.5 retina CATCTTTAAA (2) 5.3 0.0053 P2.5 retina AGCCCTATTG (3) 1.8 0.0018 P2.5 retina CTTTTTTATT (4) 1.8 0.0018 P2.5 retina GAAAGTTTTC 1.8 0.0018 P2.5 retina GCCTGTGCAT (7) 1.8 0.0018 P4.5 retina CATCTTTAAA (2) 7.9 0.0079 P4.5 retina GAAAGTTTTC 2 0.002 P4.5 retina GCCTGTGCAT (7) 2 0.002 P4.5 retina TTTGCTCTGG (5) 2 0.002 P4.5 retina TTTTATTTGT (7) 2 0.002 P6.5 retina CATCTTTAAA (2) 8.3 0.0083 P6.5 retina TCTCAAACAA (4) 1.7 0.0017 P6.5 retina TTTGCTCTGG (5) 1.7 0.0017 P10.5 crx- retina TTTTATTTGT (7) 9.3 0.0093 P10.5 crx- retina AGCCCTATTG (3) 1.9 0.0019 P10.5 crx- retina CTGTTGGGCT (2) 1.9 0.0019 P10.5 crx- retina TCTCAAACAA (4) 1.9 0.0019 P10.5 crx- retina TTTGCTCTGG (5) 1.9 0.0019 P10.5 crx+ retina GAAAGTTTTC 5.8 0.0058 P10.5 crx+ retina CATCTTTAAA (2) 1.9 0.0019 P10.5 crx+ retina CTTTTTTATT (4) 1.9 0.0019 Adult retinal CATCTTTAAA (2) 3.7 0.0037 Adult retinal TTTGCTCTGG (5) 3.7 0.0037 Adult retinal CTGTTGGGCT (2) 1.9 0.0019 Adult retinal GAAAGTTTTC 1.9 0.0019 Adult retinal TTTTATTTGT (7) 1.9 0.0019 ONL AGCCCTATTG (3) 1.9 0.0019 ONL GAAAGTTTTC 1.9 0.0019