Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.1225	Col17a1	procollagen, type XVII, alpha 1	19	19 49.0 cM	12821
Gene Ontology	cell adhesion | collagen | cytoplasm | extracellular matrix | extracellular matrix structural constituent | extracellular matrix structural constituent conferring tensile strength | hemidesmosome | integral to membrane | phosphate transport
Human Homolog	COL17A1[collagen, type XVII, alpha 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 14 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCTTCCACAC 1.6 0.0016 Cb medulloblastoma ACCAAGGACA (5) 2.3 0.0023 P8 GC+1d culture GCTTCCACAC 1.1 0.0011 P8 GC+SHH+1d culture ACCAAGGACA (5) 1.2 0.0012 E15 cortex GCTTCCACAC 4.9 0.0049 P1 cortex GCTTCCACAC 4.5 0.0045 Hypothalamus ACCAAGGACA (5) 1.8 0.0018 Hypothalamus GCAGCAGCGG (4) 1.8 0.0018 E16.5 retina ACCAAGGACA (5) 1.8 0.0018 E16.5 retina GCTTCCACAC 1.8 0.0018 P0.5 retina GCAGCAGCGG (4) 7.9 0.0079 P4.5 retina GCAGCAGCGG (4) 2 0.002 P10.5 crx- retina GCTTCCACAC 1.9 0.0019 ONL GCTTCCACAC 1.9 0.0019