Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.122538
Usp31
ubiquitin specific protease 31
7
76179
Human Homolog
USP31[ubiquitin specific protease 31]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 62 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAAAAAAAAA (
658
)
203.9
0.2039
P8 Cb GC
ATGCCTTCTT
(
6
)
1.6
0.0016
P8 Cb GC
ATTTTTGTTT (
16
)
1.6
0.0016
Cb medulloblastoma
AAAAAAAAAA (
658
)
797.8
0.7978
Cb medulloblastoma
ATGCCTTCTT
(
6
)
9.2
0.0092
Cb medulloblastoma
ACCCAAAAAA
(
5
)
4.6
0.0046
Cb medulloblastoma
ATGCCTTAAA
2.3
0.0023
Cb medulloblastoma
ATTTTTGTTT (
16
)
2.3
0.0023
P8 GC+1d culture
AAAAAAAAAA (
658
)
204.3
0.2043
P8 GC+1d culture
ATTTTTGTTT (
16
)
1.1
0.0011
P8 GC+SHH+1d culture
AAAAAAAAAA (
658
)
278.7
0.2787
P8 GC+SHH+1d culture
ATTTTTGTTT (
16
)
5.9
0.0059
P8 GC+SHH+1d culture
ATGCCTTCTT
(
6
)
2.3
0.0023
P8 GC+SHH+1d culture
CAGCTTTTAA
(
2
)
1.2
0.0012
3T3 fibroblasts
AAAAAAAAAA (
658
)
28
0.028
3T3 fibroblasts
ATGCCTTCTT
(
6
)
3.5
0.0035
E15 cortex
AAAAAAAAAA (
658
)
212.8
0.2128
P1 cortex
AAAAAAAAAA (
658
)
245.4
0.2454
P1 cortex
ATGCCTTCTT
(
6
)
4.5
0.0045
Hypothalamus
AAAAAAAAAA (
658
)
123.2
0.1232
Hypothalamus
ATGCCTTCTT
(
6
)
7.2
0.0072
Hypothalamus
ACCCAAAAAA
(
5
)
1.8
0.0018
E12.5 retina
AAAAAAAAAA (
658
)
138.9
0.1389
E12.5 retina
ATGCCTTCTT
(
6
)
3.8
0.0038
E12.5 retina
ATTTTTGTTT (
16
)
3.8
0.0038
E12.5 retina
ATGCCTTAAA
1.9
0.0019
E12.5 retina
CAGCTTTTAA
(
2
)
1.9
0.0019
E14.5 retina
AAAAAAAAAA (
658
)
94.7
0.0947
E14.5 retina
ATGCCTTCTT
(
6
)
3.6
0.0036
E14.5 retina
ACCCAAAAAA
(
5
)
1.8
0.0018
E16.5 retina
AAAAAAAAAA (
658
)
43.5
0.0435
E16.5 retina
ATGCCTTCTT
(
6
)
7.2
0.0072
E16.5 retina
ATTTTTGTTT (
16
)
1.8
0.0018
E18.5 retina
AAAAAAAAAA (
658
)
374.7
0.3747
E18.5 retina
ATGCCTTCTT
(
6
)
3.6
0.0036
E18.5 retina
ATGCCTTAAA
1.8
0.0018
E18.5 retina
ATTTTTGTTT (
16
)
1.8
0.0018
P0.5 retina
AAAAAAAAAA (
658
)
117.8
0.1178
P2.5 retina
AAAAAAAAAA (
658
)
329.1
0.3291
P2.5 retina
ATGCCTTCTT
(
6
)
3.5
0.0035
P2.5 retina
CAGCTTTTAA
(
2
)
3.5
0.0035
P2.5 retina
ACCCAAAAAA
(
5
)
1.8
0.0018
P4.5 retina
AAAAAAAAAA (
658
)
283.3
0.2833
P4.5 retina
ATGCCTTCTT
(
6
)
2
0.002
P4.5 retina
ATTTTTGTTT (
16
)
2
0.002
P6.5 retina
AAAAAAAAAA (
658
)
266.8
0.2668
P6.5 retina
ATTTTTGTTT (
16
)
1.7
0.0017
P6.5 retina
CAGCTTTTAA
(
2
)
1.7
0.0017
P10.5 crx- retina
AAAAAAAAAA (
658
)
44.6
0.0446
P10.5 crx- retina
CAGCTTTTAA
(
2
)
3.7
0.0037
P10.5 crx- retina
ATGCCTTCTT
(
6
)
1.9
0.0019
P10.5 crx- retina
ATTTTTGTTT (
16
)
1.9
0.0019
P10.5 crx+ retina
AAAAAAAAAA (
658
)
96.1
0.0961
P10.5 crx+ retina
ATTTTTGTTT (
16
)
5.8
0.0058
P10.5 crx+ retina
ATGCCTTCTT
(
6
)
1.9
0.0019
Adult retinal
AAAAAAAAAA (
658
)
57.4
0.0574
Adult retinal
ATGCCTTCTT
(
6
)
1.9
0.0019
Adult retinal
ATTTTTGTTT (
16
)
1.9
0.0019
ONL
AAAAAAAAAA (
658
)
103.4
0.1034
ONL
ATTTTTGTTT (
16
)
13.4
0.0134
ONL
ATGCCTTCTT
(
6
)
7.7
0.0077
ONL
CAGCTTTTAA
(
2
)
1.9
0.0019
