Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.1239	Gfap	glial fibrillary acidic protein	11	11 62.0 cM	14580
Gene Ontology	intermediate filament | intermediate filament-based process | protein binding | structural molecule activity
Human Homolog	GFAP[glial fibrillary acidic protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 49 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGCCATAGAA (3) 6.5 0.0065 P8 Cb GC TTCCATTTAA (2) 6.5 0.0065 P8 Cb GC TGCCATAGAC 1.6 0.0016 Cb medulloblastoma TGCCATAGAA (3) 4.6 0.0046 Cb medulloblastoma CAAGAGACAG (4) 2.3 0.0023 Cb medulloblastoma TGGAAACTTG (3) 2.3 0.0023 P8 GC+1d culture TTCCATTTAA (2) 9.1 0.0091 P8 GC+1d culture TGCCATAGAA (3) 5.7 0.0057 P8 GC+1d culture TGGAAACTTG (3) 4.6 0.0046 P8 GC+1d culture TGCCATAGAC 1.1 0.0011 P8 GC+SHH+1d culture TGCCATAGAA (3) 10.5 0.0105 P8 GC+SHH+1d culture TTCCATTTAA (2) 7 0.007 P8 GC+SHH+1d culture TGCCATAGAC 3.5 0.0035 P8 GC+SHH+1d culture CAAGAGACAG (4) 2.3 0.0023 P8 GC+SHH+1d culture TGGAAACTTG (3) 1.2 0.0012 P1 cortex TGCCATAGAC 4.5 0.0045 Hypothalamus TGCCATAGAA (3) 12.7 0.0127 Hypothalamus TTCCATTTAA (2) 9.1 0.0091 Hypothalamus TGCCATAGAC 5.4 0.0054 Hypothalamus TGGAAACTTG (3) 3.6 0.0036 E12.5 retina CAAGAGACAG (4) 3.8 0.0038 E12.5 retina TTCCATTTAA (2) 3.8 0.0038 E14.5 retina TTCCATTTAA (2) 10.9 0.0109 E14.5 retina CAAGAGACAG (4) 3.6 0.0036 E14.5 retina TGCCATAGAC 1.8 0.0018 E16.5 retina TTCCATTTAA (2) 10.9 0.0109 E16.5 retina CAAGAGACAG (4) 1.8 0.0018 E18.5 retina TTCCATTTAA (2) 16.4 0.0164 E18.5 retina CAAGAGACAG (4) 1.8 0.0018 E18.5 retina TGCCATAGAA (3) 1.8 0.0018 P0.5 retina TTCCATTTAA (2) 2 0.002 P2.5 retina TTCCATTTAA (2) 8.8 0.0088 P2.5 retina TGCCATAGAA (3) 3.5 0.0035 P2.5 retina TGCCATAGAC 1.8 0.0018 P4.5 retina TTCCATTTAA (2) 15.9 0.0159 P4.5 retina TGCCATAGAC 4 0.004 P4.5 retina CAAGAGACAG (4) 2 0.002 P6.5 retina TTCCATTTAA (2) 10 0.01 P6.5 retina CAAGAGACAG (4) 3.3 0.0033 P6.5 retina TGCCATAGAA (3) 3.3 0.0033 P10.5 crx- retina TTCCATTTAA (2) 9.3 0.0093 P10.5 crx- retina TGCCATAGAA (3) 1.9 0.0019 P10.5 crx- retina TGCCATAGAC 1.9 0.0019 P10.5 crx+ retina TTCCATTTAA (2) 3.8 0.0038 P10.5 crx+ retina TGCCATAGAC 1.9 0.0019 Adult retinal TTCCATTTAA (2) 3.7 0.0037 Adult retinal TGCCATAGAA (3) 1.9 0.0019 Adult retinal TGGAAACTTG (3) 1.9 0.0019 ONL TTCCATTTAA (2) 3.8 0.0038