Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.124176	Limk2	LIM motif-containing protein kinase 2	11	11 D	16886
Mm.124176	AL022704	expressed sequence AL022704	11		103900
Mm.124176	A930024P04Rik	RIKEN cDNA A930024P04 gene	11		320087
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 33 In Situ Hybridization Images

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SAGE Tags

Total 98 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGGTTGCTGG (369) 68.5 0.0685 P8 Cb GC AAGCAGACTA (5) 9.8 0.0098 P8 Cb GC ATGATAATAA (5) 1.6 0.0016 P8 Cb GC CCATTTTTAT (3) 1.6 0.0016 P8 Cb GC GAATAAATAA (4) 1.6 0.0016 Cb medulloblastoma TGGTTGCTGG (369) 113.3 0.1133 Cb medulloblastoma TGATGGGTTG (3) 4.6 0.0046 Cb medulloblastoma GTGGCTGGGG (7) 2.3 0.0023 P8 GC+1d culture TGGTTGCTGG (369) 57.1 0.0571 P8 GC+1d culture AAGCAGACTA (5) 4.6 0.0046 P8 GC+1d culture TGATGGGTTG (3) 2.3 0.0023 P8 GC+1d culture ATGATAATAA (5) 1.1 0.0011 P8 GC+1d culture CCATTTTTAT (3) 1.1 0.0011 P8 GC+1d culture GCGGCGCTGG (4) 1.1 0.0011 P8 GC+1d culture GGGACCCCTG (7) 1.1 0.0011 P8 GC+SHH+1d culture TGGTTGCTGG (369) 89 0.089 P8 GC+SHH+1d culture GAATAAATAA (4) 1.2 0.0012 P8 GC+SHH+1d culture GAGTATGGCC (3) 1.2 0.0012 P8 GC+SHH+1d culture TGGGTACTGG (10) 1.2 0.0012 3T3 fibroblasts TGGTTGCTGG (369) 220.8 0.2208 E15 cortex TGGTTGCTGG (369) 277.1 0.2771 E15 cortex TGATGGGTTG (3) 4.9 0.0049 P1 cortex TGGTTGCTGG (369) 86.4 0.0864 P1 cortex AAGCAGACTA (5) 4.5 0.0045 Hypothalamus TGGTTGCTGG (369) 349.6 0.3496 Hypothalamus GGGACCCCTG (7) 5.4 0.0054 Hypothalamus TGATGGGTTG (3) 5.4 0.0054 Hypothalamus AAGCAGACTA (5) 1.8 0.0018 Hypothalamus ATGATAATAA (5) 1.8 0.0018 Hypothalamus TAACCCAGGC (8) 1.8 0.0018 Hypothalamus TGGGTACTGG (10) 1.8 0.0018 E12.5 retina TGGTTGCTGG (369) 157.7 0.1577 E12.5 retina AAGCAGACTA (5) 3.8 0.0038 E12.5 retina GAATAAATAA (4) 1.9 0.0019 E12.5 retina GAGTATGGCC (3) 1.9 0.0019 E12.5 retina GGGAAGGGGA (5) 1.9 0.0019 E14.5 retina TGGTTGCTGG (369) 936.5 0.9365 E14.5 retina AAGCAGACTA (5) 5.5 0.0055 E14.5 retina ATGATAATAA (5) 1.8 0.0018 E14.5 retina GAATAAATAA (4) 1.8 0.0018 E14.5 retina GCGGCGCTGG (4) 1.8 0.0018 E14.5 retina TGGGTACTGG (10) 1.8 0.0018 E16.5 retina TGGTTGCTGG (369) 767.9 0.7679 E16.5 retina CCATTTTTAT (3) 3.6 0.0036 E16.5 retina TGATGGGTTG (3) 1.8 0.0018 E16.5 retina TGGGTACTGG (10) 1.8 0.0018 E18.5 retina TGGTTGCTGG (369) 252.8 0.2528 E18.5 retina AAGCAGACTA (5) 9.1 0.0091 E18.5 retina CCATTTTTAT (3) 3.6 0.0036 E18.5 retina TGATGGGTTG (3) 3.6 0.0036 E18.5 retina ATGATAATAA (5) 1.8 0.0018 E18.5 retina GAATAAATAA (4) 1.8 0.0018 E18.5 retina GAGTATGGCC (3) 1.8 0.0018 P0.5 retina TGGTTGCTGG (369) 190.4 0.1904 P0.5 retina AAGCAGACTA (5) 2 0.002 P0.5 retina GCTCCTGCTT (4) 2 0.002 P0.5 retina TGATGGGTTG (3) 2 0.002 P0.5 retina TGGGTACTGG (10) 2 0.002 P2.5 retina TGGTTGCTGG (369) 165.4 0.1654 P2.5 retina GGGAAGGGGA (5) 3.5 0.0035 P2.5 retina AAGCAGACTA (5) 1.8 0.0018 P2.5 retina GAATAAATAA (4) 1.8 0.0018 P2.5 retina TGATGGGTTG (3) 1.8 0.0018 P4.5 retina TGGTTGCTGG (369) 150.6 0.1506 P4.5 retina AAGCAGACTA (5) 11.9 0.0119 P4.5 retina GCTCCTGCTT (4) 2 0.002 P4.5 retina GGGAAGGGGA (5) 2 0.002 P4.5 retina GGGACCCCTG (7) 2 0.002 P4.5 retina TGGGTACTGG (10) 2 0.002 P6.5 retina TGGTTGCTGG (369) 156.7 0.1567 P6.5 retina AAGCAGACTA (5) 10 0.01 P6.5 retina TGATGGGTTG (3) 5 0.005 P6.5 retina ATGATAATAA (5) 1.7 0.0017 P6.5 retina CCATTTTTAT (3) 1.7 0.0017 P6.5 retina GCGGCGCTGG (4) 1.7 0.0017 P6.5 retina TGGGTACTGG (10) 1.7 0.0017 P10.5 crx- retina TGGTTGCTGG (369) 280.5 0.2805 P10.5 crx- retina AAGCAGACTA (5) 5.6 0.0056 P10.5 crx- retina ATGATAATAA (5) 3.7 0.0037 P10.5 crx- retina TAACCCAGGC (8) 3.7 0.0037 P10.5 crx- retina TGGGTACTGG (10) 3.7 0.0037 P10.5 crx- retina GGGACCCCTG (7) 1.9 0.0019 P10.5 crx- retina GTGGCTGGGG (7) 1.9 0.0019 P10.5 crx- retina TGATGGGTTG (3) 1.9 0.0019 P10.5 crx+ retina TGGTTGCTGG (369) 101.9 0.1019 P10.5 crx+ retina AAGCAGACTA (5) 1.9 0.0019 P10.5 crx+ retina ATGATAATAA (5) 1.9 0.0019 P10.5 crx+ retina GTGGCTGGGG (7) 1.9 0.0019 Adult retinal TGGTTGCTGG (369) 214.8 0.2148 Adult retinal AAGCAGACTA (5) 5.6 0.0056 Adult retinal TGATGGGTTG (3) 3.7 0.0037 Adult retinal CCATTTTTAT (3) 1.9 0.0019 Adult retinal GAGTATGGCC (3) 1.9 0.0019 ONL TGGTTGCTGG (369) 398.4 0.3984 ONL AAGCAGACTA (5) 3.8 0.0038 ONL ATGATAATAA (5) 3.8 0.0038 ONL GAATAAATAA (4) 1.9 0.0019 ONL TGATGGGTTG (3) 1.9 0.0019