Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.124313	D11Ertd142e	DNA segment, Chr 11, ERATO Doi 142, expressed	11	11 28.5 cM	52566
Mm.124313	Laf4l	lymphoid nuclear protein related to AF4-like	11		93736
Gene Ontology	biological_process unknown | molecular_function unknown | nucleus
Human Homolog	AF5Q31[ALL1 fused gene from 5q31]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 79 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTTTTGTATA (3) 4.9 0.0049 P8 Cb GC CGTTTAATGT (2) 3.3 0.0033 P8 Cb GC ACCGTGACTC (5) 1.6 0.0016 P8 Cb GC CAAAACAGAA (6) 1.6 0.0016 P8 Cb GC TTTGACACTC (2) 1.6 0.0016 P8 Cb GC TTTTAAAAAA (26) 1.6 0.0016 Cb medulloblastoma TTTTAAAAAA (26) 9.2 0.0092 Cb medulloblastoma CGTTTAATGT (2) 2.3 0.0023 Cb medulloblastoma GTTTTGTATA (3) 2.3 0.0023 P8 GC+1d culture CGTTTAATGT (2) 4.6 0.0046 P8 GC+1d culture GTTTTGTATA (3) 3.4 0.0034 P8 GC+1d culture TTTTAAAAAA (26) 2.3 0.0023 P8 GC+1d culture GGTGAGGGTA (2) 1.1 0.0011 P8 GC+1d culture TTTGACACTC (2) 1.1 0.0011 P8 GC+SHH+1d culture TTTTAAAAAA (26) 10.5 0.0105 P8 GC+SHH+1d culture CGTTTAATGT (2) 4.7 0.0047 P8 GC+SHH+1d culture ACCGTGACTC (5) 2.3 0.0023 P8 GC+SHH+1d culture GTTTTGTATA (3) 2.3 0.0023 P8 GC+SHH+1d culture TTTGACACTC (2) 2.3 0.0023 P8 GC+SHH+1d culture GGGCTGCTTT (4) 1.2 0.0012 3T3 fibroblasts GGGCTGCTTT (4) 7 0.007 3T3 fibroblasts CTTTTAATTC (9) 3.5 0.0035 E15 cortex CTTTTAATTC (9) 4.9 0.0049 E15 cortex GGGCTGCTTT (4) 4.9 0.0049 P1 cortex GGGCTGCTTT (4) 9.1 0.0091 P1 cortex ACCGTGACTC (5) 4.5 0.0045 P1 cortex CGTTTAATGT (2) 4.5 0.0045 P1 cortex GTTTTGTATA (3) 4.5 0.0045 P1 cortex TTTTAAAAAA (26) 4.5 0.0045 Hypothalamus TTTGACACTC (2) 3.6 0.0036 Hypothalamus ACCGTGACTC (5) 1.8 0.0018 Hypothalamus GGTGAGGGTA (2) 1.8 0.0018 Hypothalamus TTTTAAAAAA (26) 1.8 0.0018 E12.5 retina CGTTTAATGT (2) 3.8 0.0038 E12.5 retina CAAAACAGAA (6) 1.9 0.0019 E12.5 retina GGTGAGGGTA (2) 1.9 0.0019 E12.5 retina TTTTAAAAAA (26) 1.9 0.0019 E14.5 retina CGTTTAATGT (2) 5.5 0.0055 E14.5 retina TTTTAAAAAA (26) 3.6 0.0036 E14.5 retina ACCGTGACTC (5) 1.8 0.0018 E14.5 retina TTTGACACTC (2) 1.8 0.0018 E16.5 retina CGTTTAATGT (2) 7.2 0.0072 E16.5 retina ACCGTGACTC (5) 1.8 0.0018 E18.5 retina TTTTAAAAAA (26) 9.1 0.0091 E18.5 retina CAAAACAGAA (6) 1.8 0.0018 E18.5 retina GGGCTGCTTT (4) 1.8 0.0018 E18.5 retina GTTTTGTATA (3) 1.8 0.0018 P0.5 retina CGTTTAATGT (2) 9.8 0.0098 P0.5 retina GGGCTGCTTT (4) 5.9 0.0059 P2.5 retina CGTTTAATGT (2) 7 0.007 P2.5 retina TTTTAAAAAA (26) 5.3 0.0053 P2.5 retina ACCGTGACTC (5) 1.8 0.0018 P2.5 retina CAAAACAGAA (6) 1.8 0.0018 P2.5 retina GTTTTGTATA (3) 1.8 0.0018 P4.5 retina CGTTTAATGT (2) 4 0.004 P4.5 retina GGGCTGCTTT (4) 4 0.004 P4.5 retina GTTTTGTATA (3) 4 0.004 P4.5 retina TTTTAAAAAA (26) 4 0.004 P4.5 retina ACCGTGACTC (5) 2 0.002 P4.5 retina CTTTTAATTC (9) 2 0.002 P4.5 retina TTTGACACTC (2) 2 0.002 P6.5 retina CGTTTAATGT (2) 6.7 0.0067 P6.5 retina TTTTAAAAAA (26) 5 0.005 P6.5 retina ACCGTGACTC (5) 1.7 0.0017 P6.5 retina GGGCTGCTTT (4) 1.7 0.0017 P10.5 crx- retina CGTTTAATGT (2) 7.4 0.0074 P10.5 crx- retina ACCGTGACTC (5) 1.9 0.0019 P10.5 crx- retina GTTTTGTATA (3) 1.9 0.0019 P10.5 crx- retina TTTTAAAAAA (26) 1.9 0.0019 P10.5 crx+ retina CGTTTAATGT (2) 9.6 0.0096 P10.5 crx+ retina TTTGACACTC (2) 1.9 0.0019 P10.5 crx+ retina TTTTAAAAAA (26) 1.9 0.0019 Adult retinal CGTTTAATGT (2) 7.4 0.0074 Adult retinal GGGCTGCTTT (4) 3.7 0.0037 ONL CTTTTAATTC (9) 3.8 0.0038 ONL GTTTTGTATA (3) 3.8 0.0038 ONL TTTTAAAAAA (26) 3.8 0.0038 ONL ACCGTGACTC (5) 1.9 0.0019 ONL CGTTTAATGT (2) 1.9 0.0019