Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.124567	2900017F05Rik	RIKEN cDNA 2900017F05 gene	19		72915
Mm.124567	Trpm3	transient receptor potential cation channel, subfamily M, member 3	19		226025
Gene Ontology	integral to membrane | ion channel activity | ion transport | transport
Human Homolog	TRPM3[transient receptor potential cation channel, subfamily M, member 3]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 71 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TAAATATTAT (4) 9.8 0.0098 P8 Cb GC AATGTATTAT (5) 4.9 0.0049 P8 Cb GC AAGAAGAAGG (12) 1.6 0.0016 P8 Cb GC CCTGCAGCTG (8) 1.6 0.0016 P8 Cb GC GCAGTGATTT (8) 1.6 0.0016 Cb medulloblastoma AAGAAGAAGG (12) 2.3 0.0023 Cb medulloblastoma AATGTATTAT (5) 2.3 0.0023 Cb medulloblastoma CCTGCAGCTG (8) 2.3 0.0023 P8 GC+1d culture AAATCGCTTC (3) 2.3 0.0023 P8 GC+1d culture AAGAAGAAGG (12) 2.3 0.0023 P8 GC+1d culture AATGTATTAT (5) 2.3 0.0023 P8 GC+1d culture TAAATATTAT (4) 2.3 0.0023 P8 GC+1d culture ACTCCATTCA (2) 1.1 0.0011 P8 GC+1d culture CCTGCAGCTG (8) 1.1 0.0011 P8 GC+SHH+1d culture TAAATATTAT (4) 7 0.007 P8 GC+SHH+1d culture AATGTATTAT (5) 2.3 0.0023 P8 GC+SHH+1d culture CCTGCAGCTG (8) 2.3 0.0023 P8 GC+SHH+1d culture AAATCGCTTC (3) 1.2 0.0012 P8 GC+SHH+1d culture AAGAAGAAGG (12) 1.2 0.0012 3T3 fibroblasts CCTGCAGCTG (8) 3.5 0.0035 E15 cortex TAAATATTAT (4) 4.9 0.0049 P1 cortex GCTGCTTTGA (4) 4.5 0.0045 P1 cortex TGTGCTGTGT (4) 4.5 0.0045 Hypothalamus CCTGCAGCTG (8) 1.8 0.0018 E12.5 retina TAAATATTAT (4) 5.6 0.0056 E12.5 retina CCTGCAGCTG (8) 1.9 0.0019 E12.5 retina GCTGCTTTGA (4) 1.9 0.0019 E14.5 retina TAAATATTAT (4) 12.8 0.0128 E14.5 retina AATGTATTAT (5) 1.8 0.0018 E14.5 retina GCTGCTTTGA (4) 1.8 0.0018 E16.5 retina TAAATATTAT (4) 14.5 0.0145 E16.5 retina AATGTATTAT (5) 1.8 0.0018 E16.5 retina ACTCCATTCA (2) 1.8 0.0018 E16.5 retina TGTGCTGTGT (4) 1.8 0.0018 E18.5 retina TAAATATTAT (4) 21.8 0.0218 E18.5 retina AATGTATTAT (5) 3.6 0.0036 E18.5 retina CCTGCAGCTG (8) 1.8 0.0018 P0.5 retina CCTGCAGCTG (8) 3.9 0.0039 P0.5 retina AATGTATTAT (5) 2 0.002 P0.5 retina TAAATATTAT (4) 2 0.002 P2.5 retina GCTGCTTTGA (4) 7 0.007 P2.5 retina TAAATATTAT (4) 3.5 0.0035 P2.5 retina AAGAAGAAGG (12) 1.8 0.0018 P2.5 retina ACTCCATTCA (2) 1.8 0.0018 P2.5 retina CCTGCAGCTG (8) 1.8 0.0018 P2.5 retina GCTCACTGAG (8) 1.8 0.0018 P4.5 retina CCTGCAGCTG (8) 9.9 0.0099 P4.5 retina TAAATATTAT (4) 9.9 0.0099 P6.5 retina CCTGCAGCTG (8) 5 0.005 P6.5 retina ACTCCATTCA (2) 1.7 0.0017 P6.5 retina GCTCACTGAG (8) 1.7 0.0017 P6.5 retina GCTGCTTTGA (4) 1.7 0.0017 P10.5 crx- retina CCTGCAGCTG (8) 7.4 0.0074 P10.5 crx- retina AATGTATTAT (5) 3.7 0.0037 P10.5 crx- retina AAATCGCTTC (3) 1.9 0.0019 P10.5 crx- retina GCAGTGATTT (8) 1.9 0.0019 P10.5 crx- retina GCTCACTGAG (8) 1.9 0.0019 P10.5 crx- retina TGTGCTGTGT (4) 1.9 0.0019 P10.5 crx+ retina AATGTATTAT (5) 5.8 0.0058 P10.5 crx+ retina GCTGCTTTGA (4) 3.8 0.0038 P10.5 crx+ retina AAATCGCTTC (3) 1.9 0.0019 P10.5 crx+ retina CCTGCAGCTG (8) 1.9 0.0019 P10.5 crx+ retina GCAGTGATTT (8) 1.9 0.0019 P10.5 crx+ retina GCTCACTGAG (8) 1.9 0.0019 P10.5 crx+ retina TGTGCTGTGT (4) 1.9 0.0019 Adult retinal GCAGTGATTT (8) 1.9 0.0019 ONL AAGAAGAAGG (12) 3.8 0.0038 ONL AATGTATTAT (5) 1.9 0.0019 ONL CCTGCAGCTG (8) 1.9 0.0019 ONL GCTCACTGAG (8) 1.9 0.0019 ONL GCTGCTTTGA (4) 1.9 0.0019