Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.125659	Cars	cysteinyl-tRNA synthetase	7	7 69.0 cM	27267
Gene Ontology	ATP binding | cysteine-tRNA ligase activity | cysteinyl-tRNA aminoacylation | cytoplasm | ligase activity | protein biosynthesis | soluble fraction | tRNA binding
Human Homolog	CARS[cysteinyl-tRNA synthetase]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 65 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGCCATTTT (4) 8.2 0.0082 P8 Cb GC GAAGAGATGC (4) 3.3 0.0033 P8 Cb GC TTTACAGCTG (6) 1.6 0.0016 P8 Cb GC TTTCTTTCTG (5) 1.6 0.0016 Cb medulloblastoma AAGCCATTTT (4) 6.9 0.0069 Cb medulloblastoma TTACAGCTGT (5) 2.3 0.0023 Cb medulloblastoma TTTACAGCTG (6) 2.3 0.0023 Cb medulloblastoma TTTCTTTCTG (5) 2.3 0.0023 P8 GC+1d culture TTTCTTTCTG (5) 11.4 0.0114 P8 GC+1d culture AAGCCATTTT (4) 6.8 0.0068 P8 GC+1d culture TTTACAGCTG (6) 2.3 0.0023 P8 GC+1d culture TTACAGCTGT (5) 1.1 0.0011 P8 GC+SHH+1d culture AAGCCATTTT (4) 7 0.007 P8 GC+SHH+1d culture TTTCTTTCTG (5) 4.7 0.0047 P8 GC+SHH+1d culture GAAGAGATGC (4) 3.5 0.0035 P8 GC+SHH+1d culture TTACAGCTGT (5) 1.2 0.0012 P8 GC+SHH+1d culture TTTACAGCTG (6) 1.2 0.0012 3T3 fibroblasts AAGCCATTTT (4) 3.5 0.0035 3T3 fibroblasts TTTACAGCTG (6) 3.5 0.0035 E15 cortex AAGGGCTGCC (3) 4.9 0.0049 E15 cortex TTTACAGCTG (6) 4.9 0.0049 P1 cortex GAAGAGATGC (4) 4.5 0.0045 Hypothalamus TTTACAGCTG (6) 5.4 0.0054 Hypothalamus TTTCTTTCTG (5) 3.6 0.0036 Hypothalamus AAGCCATTTT (4) 1.8 0.0018 Hypothalamus GAAGAGATGC (4) 1.8 0.0018 E12.5 retina GAAGAGATGC (4) 9.4 0.0094 E12.5 retina AAGCCATTTT (4) 3.8 0.0038 E12.5 retina TTACAGCTGT (5) 1.9 0.0019 E12.5 retina TTTCTTTCTG (5) 1.9 0.0019 E14.5 retina TTTACAGCTG (6) 9.1 0.0091 E14.5 retina AAGCCATTTT (4) 5.5 0.0055 E16.5 retina TTTACAGCTG (6) 5.4 0.0054 E16.5 retina AAGCCATTTT (4) 1.8 0.0018 E16.5 retina GAAGAGATGC (4) 1.8 0.0018 E18.5 retina AAGCCATTTT (4) 3.6 0.0036 E18.5 retina TTTCTTTCTG (5) 3.6 0.0036 E18.5 retina TTTACAGCTG (6) 1.8 0.0018 P0.5 retina AAGCCATTTT (4) 5.9 0.0059 P0.5 retina GAAGAGATGC (4) 3.9 0.0039 P0.5 retina TTTACAGCTG (6) 2 0.002 P2.5 retina AAGCCATTTT (4) 8.8 0.0088 P2.5 retina TTTACAGCTG (6) 3.5 0.0035 P2.5 retina TTTCTTTCTG (5) 3.5 0.0035 P2.5 retina AAGGGCTGCC (3) 1.8 0.0018 P4.5 retina AAGCCATTTT (4) 7.9 0.0079 P4.5 retina TTTACAGCTG (6) 5.9 0.0059 P4.5 retina TTTCTTTCTG (5) 4 0.004 P4.5 retina AAGGGCTGCC (3) 2 0.002 P6.5 retina TTTACAGCTG (6) 5 0.005 P6.5 retina GAAGAGATGC (4) 3.3 0.0033 P6.5 retina TTTCTTTCTG (5) 3.3 0.0033 P6.5 retina AAGCCATTTT (4) 1.7 0.0017 P10.5 crx- retina AAGCCATTTT (4) 5.6 0.0056 P10.5 crx- retina GAAGAGATGC (4) 3.7 0.0037 P10.5 crx- retina TTTACAGCTG (6) 1.9 0.0019 P10.5 crx+ retina AAGCCATTTT (4) 5.8 0.0058 P10.5 crx+ retina TTTACAGCTG (6) 3.8 0.0038 P10.5 crx+ retina AAGGGCTGCC (3) 1.9 0.0019 P10.5 crx+ retina TTTCTTTCTG (5) 1.9 0.0019 Adult retinal TTTACAGCTG (6) 3.7 0.0037 Adult retinal TTTCTTTCTG (5) 3.7 0.0037 ONL TTTACAGCTG (6) 11.5 0.0115 ONL AAGCCATTTT (4) 1.9 0.0019 ONL TTTCTTTCTG (5) 1.9 0.0019