Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.126193	C630040K21Rik	RIKEN cDNA C630040K21 gene	3		78708
Mm.126193	Tnik	TRAF2 and NCK interacting kinase	3		69014
Gene Ontology	ATP binding | kinase activity | protein amino acid phosphorylation | protein kinase activity | protein serine/threonine kinase activity | small GTPase regulatory/interacting protein activity | transferase activity
Human Homolog	TNIK[TRAF2 and NCK interacting kinase]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 84 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TCCTTCCTTC (5) 11.4 0.0114 P8 Cb GC AGCTTTTTCT (2) 8.2 0.0082 P8 Cb GC TTTTTATTTC (3) 4.9 0.0049 P8 Cb GC CTGGCTTTTC (5) 1.6 0.0016 P8 Cb GC TAATGTTATG (2) 1.6 0.0016 P8 Cb GC TCTAAAAAAA (15) 1.6 0.0016 Cb medulloblastoma TCTAAAAAAA (15) 13.9 0.0139 Cb medulloblastoma TCCTTCCTTC (5) 4.6 0.0046 Cb medulloblastoma CTGGCTTTTC (5) 2.3 0.0023 P8 GC+1d culture AGCTTTTTCT (2) 20.5 0.0205 P8 GC+1d culture TCTAAAAAAA (15) 6.8 0.0068 P8 GC+1d culture TCCTTCCTTC (5) 5.7 0.0057 P8 GC+1d culture TTTTTATTTC (3) 2.3 0.0023 P8 GC+1d culture CTGGCTTTTC (5) 1.1 0.0011 P8 GC+1d culture GCCGCCTACG (2) 1.1 0.0011 P8 GC+1d culture TTGAAGAAAT (5) 1.1 0.0011 P8 GC+SHH+1d culture AGCTTTTTCT (2) 11.7 0.0117 P8 GC+SHH+1d culture TCCTTCCTTC (5) 7 0.007 P8 GC+SHH+1d culture GCCGCCTACG (2) 3.5 0.0035 P8 GC+SHH+1d culture TCTAAAAAAA (15) 3.5 0.0035 P8 GC+SHH+1d culture TTTTTATTTC (3) 3.5 0.0035 P8 GC+SHH+1d culture CTGGCTTTTC (5) 1.2 0.0012 E15 cortex AGCTTTTTCT (2) 24.7 0.0247 E15 cortex GCCGCCTACG (2) 9.9 0.0099 P1 cortex TCTAAAAAAA (15) 9.1 0.0091 P1 cortex CTGGCTTTTC (5) 4.5 0.0045 Hypothalamus TCCTTCCTTC (5) 12.7 0.0127 Hypothalamus TCTAAAAAAA (15) 10.9 0.0109 Hypothalamus TAATGTTATG (2) 1.8 0.0018 Hypothalamus TTTTTATTTC (3) 1.8 0.0018 E12.5 retina TCCTTCCTTC (5) 5.6 0.0056 E12.5 retina TCTAAAAAAA (15) 3.8 0.0038 E12.5 retina TTTTTATTTC (3) 3.8 0.0038 E12.5 retina AAGCAAGAAA (4) 1.9 0.0019 E14.5 retina TCCTTCCTTC (5) 5.5 0.0055 E14.5 retina TCTAAAAAAA (15) 5.5 0.0055 E14.5 retina TTTTTATTTC (3) 5.5 0.0055 E14.5 retina ACAAAACCTA (3) 3.6 0.0036 E14.5 retina GGACAAATTC (4) 1.8 0.0018 E16.5 retina TCCTTCCTTC (5) 10.9 0.0109 E16.5 retina TCTAAAAAAA (15) 3.6 0.0036 E16.5 retina AAGCAAGAAA (4) 1.8 0.0018 E16.5 retina TTTTTATTTC (3) 1.8 0.0018 E18.5 retina TCCTTCCTTC (5) 12.7 0.0127 E18.5 retina TCTAAAAAAA (15) 10.9 0.0109 E18.5 retina TTTTTATTTC (3) 7.3 0.0073 E18.5 retina AGCTTTTTCT (2) 3.6 0.0036 E18.5 retina GGACAAATTC (4) 3.6 0.0036 E18.5 retina TTGAAGAAAT (5) 1.8 0.0018 P0.5 retina GTCAAACGGG (3) 3.9 0.0039 P0.5 retina TCCTTCCTTC (5) 3.9 0.0039 P0.5 retina TTTTTATTTC (3) 3.9 0.0039 P0.5 retina AGCTTTTTCT (2) 2 0.002 P0.5 retina TCTAAAAAAA (15) 2 0.002 P2.5 retina TTTTTATTTC (3) 7 0.007 P2.5 retina TCTAAAAAAA (15) 5.3 0.0053 P2.5 retina AGCTTTTTCT (2) 3.5 0.0035 P2.5 retina TCCTTCCTTC (5) 3.5 0.0035 P4.5 retina TCTAAAAAAA (15) 11.9 0.0119 P4.5 retina TCCTTCCTTC (5) 7.9 0.0079 P4.5 retina AGCTTTTTCT (2) 4 0.004 P4.5 retina TTTTTATTTC (3) 4 0.004 P4.5 retina GTCAAACGGG (3) 2 0.002 P4.5 retina TTGAAGAAAT (5) 2 0.002 P6.5 retina TCTAAAAAAA (15) 10 0.01 P6.5 retina TCCTTCCTTC (5) 3.3 0.0033 P6.5 retina AGCTTTTTCT (2) 1.7 0.0017 P6.5 retina CTGGCTTTTC (5) 1.7 0.0017 P10.5 crx- retina TCCTTCCTTC (5) 5.6 0.0056 P10.5 crx- retina AGCTTTTTCT (2) 3.7 0.0037 P10.5 crx- retina AAGCAAGAAA (4) 1.9 0.0019 P10.5 crx- retina TCTAAAAAAA (15) 1.9 0.0019 P10.5 crx- retina TTTTTATTTC (3) 1.9 0.0019 P10.5 crx+ retina TCCTTCCTTC (5) 9.6 0.0096 P10.5 crx+ retina AGCTTTTTCT (2) 5.8 0.0058 P10.5 crx+ retina TCTAAAAAAA (15) 3.8 0.0038 P10.5 crx+ retina TAATGTTATG (2) 1.9 0.0019 P10.5 crx+ retina TTGAAGAAAT (5) 1.9 0.0019 P10.5 crx+ retina TTTTTATTTC (3) 1.9 0.0019 Adult retinal AATTCAGCCC (2) 3.7 0.0037 Adult retinal GCCGCCTACG (2) 1.9 0.0019 Adult retinal TCTAAAAAAA (15) 1.9 0.0019 ONL TCTAAAAAAA (15) 3.8 0.0038 ONL AATTCAGCCC (2) 1.9 0.0019