Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.126649
Zfp533
zinc finger protein 533
2
2 C3
241494
Mm.126649
C130013B13Rik
RIKEN cDNA C130013B13 gene
2
319834
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
Total 9 In Situ Hybridization Images
Images -- Click to Enlarge
SAGE Tags
Total 58 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CTGCTGGTGG (
15
)
13.1
0.0131
P8 Cb GC
AAATAAAGAA
(
3
)
1.6
0.0016
P8 Cb GC
AAATTAAGAA (
3
)
1.6
0.0016
P8 Cb GC
CTTCCCCTCC
(
2
)
1.6
0.0016
P8 Cb GC
GCGGTTTTTT
(
4
)
1.6
0.0016
Cb medulloblastoma
CTGCTGGTGG (
15
)
11.6
0.0116
Cb medulloblastoma
GCGGTTTTTT
(
4
)
4.6
0.0046
Cb medulloblastoma
CTTCCCCTCC
(
2
)
2.3
0.0023
Cb medulloblastoma
TGAAACAACA (
9
)
2.3
0.0023
P8 GC+1d culture
CTGCTGGTGG (
15
)
16
0.016
P8 GC+SHH+1d culture
CTGCTGGTGG (
15
)
10.5
0.0105
P8 GC+SHH+1d culture
AAATAAAGAA
(
3
)
3.5
0.0035
P8 GC+SHH+1d culture
AAAAATAAAT (
10
)
1.2
0.0012
P8 GC+SHH+1d culture
TTTTATTTGG
(
6
)
1.2
0.0012
3T3 fibroblasts
CTGCTGGTGG (
15
)
59.6
0.0596
3T3 fibroblasts
GGAACACACA
(
4
)
3.5
0.0035
E15 cortex
CTGCTGGTGG (
15
)
9.9
0.0099
P1 cortex
CTGCTGGTGG (
15
)
4.5
0.0045
P1 cortex
TGAAACAACA (
9
)
4.5
0.0045
Hypothalamus
CTGCTGGTGG (
15
)
7.2
0.0072
Hypothalamus
TTTTATTTGG
(
6
)
1.8
0.0018
E12.5 retina
AAATAAAGAA
(
3
)
1.9
0.0019
E12.5 retina
AAATTAAGAA (
3
)
1.9
0.0019
E12.5 retina
GGAACACACA
(
4
)
1.9
0.0019
E14.5 retina
CTGCTGGTGG (
15
)
1.8
0.0018
E18.5 retina
CTGCTGGTGG (
15
)
3.6
0.0036
E18.5 retina
AAAAATAAAT (
10
)
1.8
0.0018
E18.5 retina
TTTTATTTGG
(
6
)
1.8
0.0018
P0.5 retina
CTGCTGGTGG (
15
)
9.8
0.0098
P2.5 retina
CTGCTGGTGG (
15
)
5.3
0.0053
P2.5 retina
CTTCCCCTCC
(
2
)
3.5
0.0035
P2.5 retina
AAATAAAGAA
(
3
)
1.8
0.0018
P4.5 retina
CTTCCCCTCC
(
2
)
5.9
0.0059
P4.5 retina
CTGCTGGTGG (
15
)
2
0.002
P4.5 retina
GGAACACACA
(
4
)
2
0.002
P6.5 retina
CTTCCCCTCC
(
2
)
11.7
0.0117
P6.5 retina
AAATAAAGAA
(
3
)
6.7
0.0067
P6.5 retina
CTGCTGGTGG (
15
)
6.7
0.0067
P6.5 retina
AAAAATAAAT (
10
)
3.3
0.0033
P6.5 retina
GCGGTTTTTT
(
4
)
1.7
0.0017
P6.5 retina
GGAACACACA
(
4
)
1.7
0.0017
P6.5 retina
TTTTATTTGG
(
6
)
1.7
0.0017
P10.5 crx- retina
CTGCTGGTGG (
15
)
11.1
0.0111
P10.5 crx- retina
CTTCCCCTCC
(
2
)
7.4
0.0074
P10.5 crx- retina
AAAAATAAAT (
10
)
1.9
0.0019
P10.5 crx- retina
AAATAAAGAA
(
3
)
1.9
0.0019
P10.5 crx- retina
GGAACACACA
(
4
)
1.9
0.0019
P10.5 crx+ retina
CTGCTGGTGG (
15
)
3.8
0.0038
P10.5 crx+ retina
AAATAAAGAA
(
3
)
1.9
0.0019
P10.5 crx+ retina
CTTCCCCTCC
(
2
)
1.9
0.0019
P10.5 crx+ retina
TGAAACAACA (
9
)
1.9
0.0019
Adult retinal
CTGCTGGTGG (
15
)
20.4
0.0204
Adult retinal
GCGGTTTTTT
(
4
)
1.9
0.0019
ONL
AAATTAAGAA (
3
)
7.7
0.0077
ONL
CTGCTGGTGG (
15
)
7.7
0.0077
ONL
AAAAATAAAT (
10
)
3.8
0.0038
ONL
AAATAAAGAA
(
3
)
1.9
0.0019
ONL
TTTTATTTGG
(
6
)
1.9
0.0019
