Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.1268	Plp1	proteolipid protein (myelin) 1	X	X 56.0 cM	18823
Gene Ontology	integral to membrane | myelination | nerve ensheathment | nerve ensheathment | structural molecule activity | synaptic transmission
Human Homolog	PLP1[proteolipid protein 1 (Pelizaeus-Merzbacher disease, spastic paraplegia 2, uncomplicated)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 101 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTTGTTAAAA (4) 22.8 0.0228 P8 Cb GC CACACACACA (106) 11.4 0.0114 P8 Cb GC AAATTATTGG (4) 8.2 0.0082 P8 Cb GC GGCTTTCCAG (8) 3.3 0.0033 P8 Cb GC TATTTCAAAA (14) 3.3 0.0033 P8 Cb GC GGCTCTATAA (2) 1.6 0.0016 Cb medulloblastoma CACACACACA (106) 32.4 0.0324 Cb medulloblastoma AAATTATTGG (4) 23.1 0.0231 Cb medulloblastoma TTTGTTAAAA (4) 16.2 0.0162 Cb medulloblastoma GGACCGTACA 13.9 0.0139 Cb medulloblastoma GGCCGAGGCA (2) 9.2 0.0092 Cb medulloblastoma GGCTCTATAA (2) 6.9 0.0069 Cb medulloblastoma TATTTCAAAA (14) 4.6 0.0046 Cb medulloblastoma GGCTTTCCAG (8) 2.3 0.0023 Cb medulloblastoma TAAGAAACCA (2) 2.3 0.0023 P8 GC+1d culture TTTGTTAAAA (4) 24 0.024 P8 GC+1d culture CACACACACA (106) 6.8 0.0068 P8 GC+1d culture GGCTTTCCAG (8) 3.4 0.0034 P8 GC+1d culture GGCTCTATAA (2) 2.3 0.0023 P8 GC+1d culture TATTTCAAAA (14) 2.3 0.0023 P8 GC+SHH+1d culture TTTGTTAAAA (4) 16.4 0.0164 P8 GC+SHH+1d culture CACACACACA (106) 9.4 0.0094 P8 GC+SHH+1d culture GGCTCTATAA (2) 2.3 0.0023 P8 GC+SHH+1d culture TAAGAAACCA (2) 2.3 0.0023 P8 GC+SHH+1d culture TATTTCAAAA (14) 2.3 0.0023 P8 GC+SHH+1d culture AAATTATTGG (4) 1.2 0.0012 3T3 fibroblasts CACACACACA (106) 17.5 0.0175 3T3 fibroblasts GGCCGGGGCC (5) 3.5 0.0035 3T3 fibroblasts GGCTTTCCAG (8) 3.5 0.0035 E15 cortex CACACACACA (106) 4.9 0.0049 E15 cortex TTTGTTAAAA (4) 4.9 0.0049 P1 cortex CACACACACA (106) 27.3 0.0273 P1 cortex TTTGTTAAAA (4) 9.1 0.0091 Hypothalamus CACACACACA (106) 96 0.096 Hypothalamus AAATTATTGG (4) 48.9 0.0489 Hypothalamus GGACCGTACA 36.2 0.0362 Hypothalamus TGTTCTTCCC (4) 19.9 0.0199 Hypothalamus GGCCGAGGCA (2) 10.9 0.0109 Hypothalamus TAAGAAACCA (2) 10.9 0.0109 Hypothalamus TTTGTTAAAA (4) 7.2 0.0072 Hypothalamus CTATCCAAAG 5.4 0.0054 Hypothalamus TATTTCAAAA (14) 3.6 0.0036 Hypothalamus GGCTCTATAA (2) 1.8 0.0018 Hypothalamus GGCTTTCCAG (8) 1.8 0.0018 E12.5 retina TTTGTTAAAA (4) 5.6 0.0056 E12.5 retina CACACACACA (106) 3.8 0.0038 E12.5 retina GGCTTTCCAG (8) 1.9 0.0019 E14.5 retina CACACACACA (106) 18.2 0.0182 E14.5 retina TTTGTTAAAA (4) 14.6 0.0146 E14.5 retina TATTTCAAAA (14) 5.5 0.0055 E16.5 retina CACACACACA (106) 12.7 0.0127 E16.5 retina TTTGTTAAAA (4) 5.4 0.0054 E16.5 retina GGCTCTATAA (2) 1.8 0.0018 E16.5 retina GGCTTTCCAG (8) 1.8 0.0018 E16.5 retina TAAGAAACCA (2) 1.8 0.0018 E16.5 retina TATTTCAAAA (14) 1.8 0.0018 E18.5 retina TTTGTTAAAA (4) 54.6 0.0546 E18.5 retina CACACACACA (106) 5.5 0.0055 E18.5 retina GGCCGGGGCC (5) 1.8 0.0018 E18.5 retina GGCTTTCCAG (8) 1.8 0.0018 E18.5 retina TATTTCAAAA (14) 1.8 0.0018 P0.5 retina CACACACACA (106) 7.9 0.0079 P0.5 retina TTTGTTAAAA (4) 3.9 0.0039 P0.5 retina GGCTTTCCAG (8) 2 0.002 P2.5 retina TTTGTTAAAA (4) 24.6 0.0246 P2.5 retina CACACACACA (106) 21.1 0.0211 P2.5 retina GGCTTTCCAG (8) 5.3 0.0053 P2.5 retina TAAGAAACCA (2) 5.3 0.0053 P2.5 retina TATTTCAAAA (14) 3.5 0.0035 P2.5 retina CTCCCCACTA 1.8 0.0018 P4.5 retina TTTGTTAAAA (4) 29.7 0.0297 P4.5 retina CACACACACA (106) 7.9 0.0079 P4.5 retina GGCCGAGGCA (2) 2 0.002 P4.5 retina GGCTTTCCAG (8) 2 0.002 P4.5 retina TAAGAAACCA (2) 2 0.002 P4.5 retina TATTTCAAAA (14) 2 0.002 P6.5 retina TTTGTTAAAA (4) 16.7 0.0167 P6.5 retina CACACACACA (106) 8.3 0.0083 P6.5 retina CTCCCCACTA 1.7 0.0017 P6.5 retina TATTTCAAAA (14) 1.7 0.0017 P10.5 crx- retina TTTGTTAAAA (4) 9.3 0.0093 P10.5 crx- retina CACACACACA (106) 5.6 0.0056 P10.5 crx- retina GGCTCTATAA (2) 1.9 0.0019 P10.5 crx- retina GGCTTTCCAG (8) 1.9 0.0019 P10.5 crx+ retina TTTGTTAAAA (4) 11.5 0.0115 P10.5 crx+ retina CACACACACA (106) 7.7 0.0077 P10.5 crx+ retina GGCTTTCCAG (8) 5.8 0.0058 P10.5 crx+ retina CTCCCCACTA 1.9 0.0019 P10.5 crx+ retina GGACCGTACA 1.9 0.0019 P10.5 crx+ retina GGCCGGGGCC (5) 1.9 0.0019 P10.5 crx+ retina TATTTCAAAA (14) 1.9 0.0019 Adult retinal CACACACACA (106) 16.7 0.0167 Adult retinal TTTGTTAAAA (4) 9.3 0.0093 Adult retinal GGCTCTATAA (2) 3.7 0.0037 Adult retinal GGCTTTCCAG (8) 3.7 0.0037 Adult retinal TATTTCAAAA (14) 1.9 0.0019 ONL CACACACACA (106) 21.1 0.0211 ONL TTTGTTAAAA (4) 19.2 0.0192 ONL GGCCGGGGCC (5) 1.9 0.0019 ONL GGCTTTCCAG (8) 1.9 0.0019 ONL TATTTCAAAA (14) 1.9 0.0019