Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.126885	Socs5	suppressor of cytokine signaling 5	17		56468
Mm.126885	AA673181	expressed sequence AA673181	17		106506
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 78 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAAAAAAAAA (204) 45.7 0.0457 P8 Cb GC GGGGGAGGGA (9) 4.9 0.0049 P8 Cb GC TGCAGTCAGT (2) 3.3 0.0033 P8 Cb GC GAGGGGTGCT (3) 1.6 0.0016 Cb medulloblastoma GAAAAAAAAA (204) 173.4 0.1734 Cb medulloblastoma TGTCCACTGT (3) 4.6 0.0046 Cb medulloblastoma GCTATTGCCA (3) 2.3 0.0023 P8 GC+1d culture GAAAAAAAAA (204) 41.1 0.0411 P8 GC+1d culture TGCAGTCAGT (2) 6.8 0.0068 P8 GC+1d culture GGGGGAGGGA (9) 4.6 0.0046 P8 GC+1d culture GGACAGAAAG (5) 2.3 0.0023 P8 GC+1d culture GAGGGGTGCT (3) 1.1 0.0011 P8 GC+1d culture TGTCCACTGT (3) 1.1 0.0011 P8 GC+SHH+1d culture GAAAAAAAAA (204) 77.3 0.0773 P8 GC+SHH+1d culture TGCAGTCAGT (2) 3.5 0.0035 P8 GC+SHH+1d culture GAGGGGTGCT (3) 1.2 0.0012 P8 GC+SHH+1d culture GGACAGAAAG (5) 1.2 0.0012 P8 GC+SHH+1d culture GGGGGAGGGA (9) 1.2 0.0012 3T3 fibroblasts GCTATTGCCA (3) 7 0.007 3T3 fibroblasts TGTCCACTGT (3) 7 0.007 3T3 fibroblasts GAGGGGTGCT (3) 3.5 0.0035 3T3 fibroblasts GGACAGAAAG (5) 3.5 0.0035 3T3 fibroblasts GGGGGAGGGA (9) 3.5 0.0035 E15 cortex GAAAAAAAAA (204) 54.4 0.0544 E15 cortex GAGGGGTGCT (3) 14.8 0.0148 E15 cortex TGCAGTCAGT (2) 9.9 0.0099 P1 cortex GAAAAAAAAA (204) 45.5 0.0455 Hypothalamus GAAAAAAAAA (204) 67 0.067 Hypothalamus TGTCCACTGT (3) 3.6 0.0036 Hypothalamus GAGGGGTGCT (3) 1.8 0.0018 Hypothalamus GCTATTGCCA (3) 1.8 0.0018 E12.5 retina GAAAAAAAAA (204) 46.9 0.0469 E12.5 retina GAAACTTGGG (13) 3.8 0.0038 E12.5 retina GGACAGAAAG (5) 3.8 0.0038 E14.5 retina GAAAAAAAAA (204) 34.6 0.0346 E14.5 retina GAGGGGTGCT (3) 5.5 0.0055 E14.5 retina GAAACTTGGG (13) 1.8 0.0018 E14.5 retina GGGGGAGGGA (9) 1.8 0.0018 E16.5 retina GAAAAAAAAA (204) 23.5 0.0235 E16.5 retina GAGGGGTGCT (3) 5.4 0.0054 E16.5 retina GCTATTGCCA (3) 3.6 0.0036 E18.5 retina GAAAAAAAAA (204) 65.5 0.0655 E18.5 retina GAGGGGTGCT (3) 1.8 0.0018 E18.5 retina GCTATTGCCA (3) 1.8 0.0018 P0.5 retina GAAAAAAAAA (204) 35.3 0.0353 P0.5 retina GAGGGGTGCT (3) 3.9 0.0039 P0.5 retina GGACAGAAAG (5) 2 0.002 P0.5 retina TGCAGTCAGT (2) 2 0.002 P2.5 retina GAAAAAAAAA (204) 86.2 0.0862 P2.5 retina GAGGGGTGCT (3) 5.3 0.0053 P2.5 retina GAAACTTGGG (13) 1.8 0.0018 P4.5 retina GAAAAAAAAA (204) 51.5 0.0515 P4.5 retina GAGGGGTGCT (3) 2 0.002 P4.5 retina GGGGGAGGGA (9) 2 0.002 P6.5 retina GAAAAAAAAA (204) 40 0.04 P6.5 retina GGGGGAGGGA (9) 6.7 0.0067 P6.5 retina AAGATGGAAG (3) 5 0.005 P6.5 retina GCTATTGCCA (3) 3.3 0.0033 P6.5 retina TGTCCACTGT (3) 3.3 0.0033 P6.5 retina GAGGGGTGCT (3) 1.7 0.0017 P10.5 crx- retina GAAAAAAAAA (204) 16.7 0.0167 P10.5 crx- retina GCTATTGCCA (3) 9.3 0.0093 P10.5 crx- retina TGTCCACTGT (3) 5.6 0.0056 P10.5 crx- retina GAGGGGTGCT (3) 1.9 0.0019 P10.5 crx+ retina GAAAAAAAAA (204) 42.3 0.0423 P10.5 crx+ retina TGTCCACTGT (3) 7.7 0.0077 P10.5 crx+ retina GCTATTGCCA (3) 5.8 0.0058 P10.5 crx+ retina GAGGGGTGCT (3) 1.9 0.0019 P10.5 crx+ retina GGACAGAAAG (5) 1.9 0.0019 P10.5 crx+ retina GGGGGAGGGA (9) 1.9 0.0019 P10.5 crx+ retina TGCAGTCAGT (2) 1.9 0.0019 Adult retinal GAAAAAAAAA (204) 16.7 0.0167 Adult retinal GAAACTTGGG (13) 3.7 0.0037 Adult retinal GCTATTGCCA (3) 3.7 0.0037 Adult retinal TGTCCACTGT (3) 1.9 0.0019 ONL GAAAAAAAAA (204) 24.9 0.0249 ONL GAGGGGTGCT (3) 1.9 0.0019 ONL GCTATTGCCA (3) 1.9 0.0019