Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.127376	5930420B01Rik	RIKEN cDNA 5930420B01 gene	2		109208
Mm.127376	E130006N16Rik	RIKEN cDNA E130006N16 gene	2		320068
Mm.127376	9130231A04Rik	RIKEN cDNA 9130231A04 gene	2		77667
Mm.127376	1110051M20Rik	RIKEN cDNA 1110051M20 gene	2		228356
Human Homolog	MGC4707[MGC4707 protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 37 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGCTGGGAAG (8) 3.3 0.0033 P8 Cb GC GATGAAGAGC (7) 1.6 0.0016 P8 Cb GC GGATGAAAAA (9) 1.6 0.0016 Cb medulloblastoma CTCTCAGGAA (5) 2.3 0.0023 Cb medulloblastoma TGCTGGGAAG (8) 2.3 0.0023 P8 GC+1d culture TGCTGGGAAG (8) 6.8 0.0068 P8 GC+1d culture GGATGAAAAA (9) 1.1 0.0011 P8 GC+SHH+1d culture TGCTGGGAAG (8) 5.9 0.0059 P8 GC+SHH+1d culture CTCTCAGGAA (5) 1.2 0.0012 P8 GC+SHH+1d culture GAGGATGCAG (6) 1.2 0.0012 E15 cortex TGCTGGGAAG (8) 9.9 0.0099 E15 cortex GAGGATGCAG (6) 4.9 0.0049 P1 cortex TGCTGGGAAG (8) 4.5 0.0045 Hypothalamus TGCTGGGAAG (8) 7.2 0.0072 Hypothalamus CTCTCAGGAA (5) 1.8 0.0018 E12.5 retina GACTGGCTGA (5) 1.9 0.0019 E16.5 retina CTCTCAGGAA (5) 3.6 0.0036 E16.5 retina TGCTGGGAAG (8) 3.6 0.0036 E18.5 retina GGATGAAAAA (9) 1.8 0.0018 E18.5 retina TGCTGGGAAG (8) 1.8 0.0018 P0.5 retina TGCTGGGAAG (8) 7.9 0.0079 P2.5 retina TGCTGGGAAG (8) 3.5 0.0035 P4.5 retina TGCTGGGAAG (8) 4 0.004 P4.5 retina CTCTCAGGAA (5) 2 0.002 P6.5 retina GACTGGCTGA (5) 3.3 0.0033 P6.5 retina GATGAAGAGC (7) 1.7 0.0017 P6.5 retina TGCTGGGAAG (8) 1.7 0.0017 P10.5 crx- retina TGCTGGGAAG (8) 11.1 0.0111 P10.5 crx- retina GAGGATGCAG (6) 3.7 0.0037 P10.5 crx+ retina TGCTGGGAAG (8) 11.5 0.0115 Adult retinal TGCTGGGAAG (8) 11.1 0.0111 Adult retinal CTCTCAGGAA (5) 1.9 0.0019 Adult retinal GATGAAGAGC (7) 1.9 0.0019 ONL TGCTGGGAAG (8) 7.7 0.0077 ONL GAGGATGCAG (6) 1.9 0.0019 ONL GATGAAGAGC (7) 1.9 0.0019 ONL GGATGAAAAA (9) 1.9 0.0019