Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.127681
Atcay
ataxia, cerebellar, Cayman type homolog (human)
10
10 43.0 cM
16467
Gene Ontology
transport
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 66 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TAGCTCAGGC (
4
)
1.6
0.0016
Cb medulloblastoma
TACTGATCAG
(
3
)
6.9
0.0069
Cb medulloblastoma
CACGCACACA (
9
)
2.3
0.0023
Cb medulloblastoma
GCAGCAAGGA
2.3
0.0023
Cb medulloblastoma
GGGAAGGGCT
(
7
)
2.3
0.0023
P8 GC+1d culture
GGGAAGGGCT
(
7
)
3.4
0.0034
P8 GC+1d culture
AGGGTGCTGG (
5
)
2.3
0.0023
P8 GC+1d culture
TACTGATCAG
(
3
)
2.3
0.0023
P8 GC+1d culture
TAGCTCAGGC (
4
)
2.3
0.0023
P8 GC+1d culture
AGGCTGCTGG (
5
)
1.1
0.0011
P8 GC+SHH+1d culture
GGGAAGGGCT
(
7
)
8.2
0.0082
P8 GC+SHH+1d culture
AGGGTGCTGG (
5
)
2.3
0.0023
P8 GC+SHH+1d culture
GCAGCAAGGA
2.3
0.0023
P8 GC+SHH+1d culture
CACGCACACA (
9
)
1.2
0.0012
P8 GC+SHH+1d culture
TAGCTCAGGC (
4
)
1.2
0.0012
3T3 fibroblasts
AGGCTGCTGG (
5
)
7
0.007
3T3 fibroblasts
AGGGTGCTGG (
5
)
3.5
0.0035
3T3 fibroblasts
TAGCTCAGGC (
4
)
3.5
0.0035
E15 cortex
GGGAAGGGCT
(
7
)
14.8
0.0148
E15 cortex
TAGCTCAGGC (
4
)
9.9
0.0099
E15 cortex
TCTGCCCGAG
9.9
0.0099
E15 cortex
AGGCTGCTGG (
5
)
4.9
0.0049
E15 cortex
AGGGTGCTGG (
5
)
4.9
0.0049
E15 cortex
TACTGATCAG
(
3
)
4.9
0.0049
P1 cortex
GGGAAGGGCT
(
7
)
9.1
0.0091
P1 cortex
AGGGTGCTGG (
5
)
4.5
0.0045
P1 cortex
TCTGCCCGAG
4.5
0.0045
Hypothalamus
GGGAAGGGCT
(
7
)
7.2
0.0072
Hypothalamus
TACTGATCAG
(
3
)
7.2
0.0072
Hypothalamus
TAGCTCAGGC (
4
)
5.4
0.0054
Hypothalamus
AGGGTGCTGG (
5
)
3.6
0.0036
Hypothalamus
CACGCACACA (
9
)
3.6
0.0036
E12.5 retina
AGGGTGCTGG (
5
)
3.8
0.0038
E14.5 retina
GGGAAGGGCT
(
7
)
3.6
0.0036
E16.5 retina
TAGCTCAGGC (
4
)
3.6
0.0036
E16.5 retina
AGGCTGCTGG (
5
)
1.8
0.0018
E18.5 retina
TAGCTCAGGC (
4
)
7.3
0.0073
E18.5 retina
CACGCACACA (
9
)
1.8
0.0018
E18.5 retina
GGAAACACAG (
3
)
1.8
0.0018
E18.5 retina
GGAACCACAC
(
4
)
1.8
0.0018
E18.5 retina
GGGAAGGGCT
(
7
)
1.8
0.0018
P0.5 retina
TAGCTCAGGC (
4
)
7.9
0.0079
P0.5 retina
AGGGTGCTGG (
5
)
5.9
0.0059
P0.5 retina
GGAACCACAC
(
4
)
3.9
0.0039
P0.5 retina
GGGAAGGGCT
(
7
)
3.9
0.0039
P2.5 retina
GGGAAGGGCT
(
7
)
8.8
0.0088
P2.5 retina
TAGCTCAGGC (
4
)
3.5
0.0035
P2.5 retina
AGGGTGCTGG (
5
)
1.8
0.0018
P2.5 retina
GGAAACACAG (
3
)
1.8
0.0018
P2.5 retina
TACTGATCAG
(
3
)
1.8
0.0018
P4.5 retina
TAGCTCAGGC (
4
)
15.9
0.0159
P4.5 retina
GGGAAGGGCT
(
7
)
2
0.002
P6.5 retina
TAGCTCAGGC (
4
)
23.3
0.0233
P6.5 retina
AGGCTGCTGG (
5
)
1.7
0.0017
P6.5 retina
GGGAAGGGCT
(
7
)
1.7
0.0017
P10.5 crx- retina
TAGCTCAGGC (
4
)
9.3
0.0093
P10.5 crx- retina
GGGAAGGGCT
(
7
)
5.6
0.0056
P10.5 crx- retina
CACGCACACA (
9
)
1.9
0.0019
P10.5 crx+ retina
TAGCTCAGGC (
4
)
5.8
0.0058
P10.5 crx+ retina
GGAACCACAC
(
4
)
1.9
0.0019
P10.5 crx+ retina
GGGAAGGGCT
(
7
)
1.9
0.0019
Adult retinal
TAGCTCAGGC (
4
)
42.6
0.0426
Adult retinal
GGAAACACAG (
3
)
1.9
0.0019
Adult retinal
GGGAAGGGCT
(
7
)
1.9
0.0019
Adult retinal
TCTGCCCGAG
1.9
0.0019
ONL
TAGCTCAGGC (
4
)
9.6
0.0096
