Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.128227
5730568A12Rik
RIKEN cDNA 5730568A12 gene
9
66658
Human Homolog
FLJ12436[hypothetical protein FLJ12436]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 36 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GTGGTTGAAA (
8
)
9.8
0.0098
P8 Cb GC
GTGGCTCGTG
(
2
)
1.6
0.0016
Cb medulloblastoma
GTGGCTCGTG
(
2
)
6.9
0.0069
Cb medulloblastoma
GTGGTTGAAA (
8
)
4.6
0.0046
Cb medulloblastoma
CTGTTCAAGA
(
3
)
2.3
0.0023
Cb medulloblastoma
TAAAGGAAAG (
2
)
2.3
0.0023
P8 GC+1d culture
GTGGTTGAAA (
8
)
6.8
0.0068
P8 GC+1d culture
CTGTTCAAGA
(
3
)
1.1
0.0011
P8 GC+1d culture
GTGGCTCGTG
(
2
)
1.1
0.0011
P8 GC+SHH+1d culture
GTGGTTGAAA (
8
)
9.4
0.0094
P8 GC+SHH+1d culture
TAAAGGAAAG (
2
)
3.5
0.0035
P8 GC+SHH+1d culture
CTGTTCAAGA
(
3
)
1.2
0.0012
3T3 fibroblasts
GTGGCTCGTG
(
2
)
3.5
0.0035
E15 cortex
GTGGTTGAAA (
8
)
34.6
0.0346
E15 cortex
GTGGCTCGTG
(
2
)
4.9
0.0049
P1 cortex
GTGGTTGAAA (
8
)
9.1
0.0091
P1 cortex
TAAAGGAAAG (
2
)
4.5
0.0045
Hypothalamus
GTGGTTGAAA (
8
)
14.5
0.0145
E12.5 retina
GTGGTTGAAA (
8
)
28.2
0.0282
E14.5 retina
GTGGTTGAAA (
8
)
23.7
0.0237
E14.5 retina
TAAAGGAAAG (
2
)
5.5
0.0055
E14.5 retina
CTGTTCAAGA
(
3
)
3.6
0.0036
E16.5 retina
GTGGTTGAAA (
8
)
23.5
0.0235
E16.5 retina
GTGGCTCGTG
(
2
)
3.6
0.0036
E18.5 retina
GTGGTTGAAA (
8
)
61.8
0.0618
P0.5 retina
GTGGTTGAAA (
8
)
17.7
0.0177
P2.5 retina
GTGGTTGAAA (
8
)
19.4
0.0194
P4.5 retina
GTGGTTGAAA (
8
)
17.8
0.0178
P4.5 retina
GTGGCTCGTG
(
2
)
2
0.002
P6.5 retina
GTGGTTGAAA (
8
)
11.7
0.0117
P6.5 retina
CTGTTCAAGA
(
3
)
1.7
0.0017
P10.5 crx- retina
GTGGTTGAAA (
8
)
1.9
0.0019
P10.5 crx+ retina
GTGGTTGAAA (
8
)
3.8
0.0038
P10.5 crx+ retina
GTGGCTCGTG
(
2
)
1.9
0.0019
Adult retinal
CTGTTCAAGA
(
3
)
9.3
0.0093
Adult retinal
GTGGTTGAAA (
8
)
3.7
0.0037
