Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.128273	D030054H19Rik	RIKEN cDNA D030054H19 gene	2		99049
Mm.128273	Suv39h2	suppressor of variegation 3-9 homolog 2 (Drosophila)	2	2 2.5 cM	64707
Gene Ontology	chromatin | chromatin assembly/disassembly | chromatin binding | chromatin modification | histone-lysine N-methyltransferase activity | methyltransferase activity | nuclear heterochromatin | nucleus | protein methyltransferase activity | transferase activity | zinc ion binding
Human Homolog	SUV39H2[suppressor of variegation 3-9 homolog 2 (Drosophila)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 74 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CACAAAATAA (10) 6.5 0.0065 P8 Cb GC CGCACACACA (8) 6.5 0.0065 P8 Cb GC ATTCCGAATT (107) 1.6 0.0016 P8 Cb GC CACACATACA (9) 1.6 0.0016 P8 Cb GC CCCTTTTGAA (3) 1.6 0.0016 P8 Cb GC GCTCAAGTCA (2) 1.6 0.0016 Cb medulloblastoma CACAAAATAA (10) 6.9 0.0069 Cb medulloblastoma CGCACACACA (8) 6.9 0.0069 P8 GC+1d culture CGCACACACA (8) 12.6 0.0126 P8 GC+1d culture CACAAAATAA (10) 8 0.008 P8 GC+1d culture AAGAAAAAGC (6) 3.4 0.0034 P8 GC+1d culture CACACATACA (9) 1.1 0.0011 P8 GC+SHH+1d culture CGCACACACA (8) 10.5 0.0105 P8 GC+SHH+1d culture CACAAAATAA (10) 5.9 0.0059 P8 GC+SHH+1d culture AAGAAAAAGC (6) 1.2 0.0012 P8 GC+SHH+1d culture CACACATACA (9) 1.2 0.0012 P8 GC+SHH+1d culture CCCTTTTGAA (3) 1.2 0.0012 P8 GC+SHH+1d culture CTCTGTGAAT (8) 1.2 0.0012 P8 GC+SHH+1d culture GCTCAAGTCA (2) 1.2 0.0012 E15 cortex CGCACACACA (8) 19.8 0.0198 Hypothalamus CGCACACACA (8) 3.6 0.0036 Hypothalamus ACCAAGGTAA (4) 1.8 0.0018 Hypothalamus CACAAAATAA (10) 1.8 0.0018 Hypothalamus CACACATACA (9) 1.8 0.0018 Hypothalamus CTCTGTGAAT (8) 1.8 0.0018 E12.5 retina CACACATACA (9) 3.8 0.0038 E12.5 retina AAGAAAAAGC (6) 1.9 0.0019 E12.5 retina CACAAAATAA (10) 1.9 0.0019 E12.5 retina CGCACACACA (8) 1.9 0.0019 E14.5 retina CACAAAATAA (10) 3.6 0.0036 E14.5 retina CACACATACA (9) 3.6 0.0036 E14.5 retina CGCACACACA (8) 1.8 0.0018 E16.5 retina CACACATACA (9) 3.6 0.0036 E16.5 retina CCCTTTTGAA (3) 3.6 0.0036 E16.5 retina CTCTGTGAAT (8) 1.8 0.0018 E18.5 retina CACAAAATAA (10) 1.8 0.0018 P0.5 retina CACACATACA (9) 5.9 0.0059 P0.5 retina CGCACACACA (8) 5.9 0.0059 P0.5 retina CCCTTTTGAA (3) 3.9 0.0039 P0.5 retina GAATATGTTG (2) 3.9 0.0039 P2.5 retina CACAAAATAA (10) 3.5 0.0035 P2.5 retina AAGAAAAAGC (6) 1.8 0.0018 P2.5 retina GAATATGTTG (2) 1.8 0.0018 P4.5 retina CACAAAATAA (10) 4 0.004 P4.5 retina CACACATACA (9) 4 0.004 P4.5 retina ACCAAGGTAA (4) 2 0.002 P4.5 retina ATTCCGAATT (107) 2 0.002 P4.5 retina CCCTTTTGAA (3) 2 0.002 P4.5 retina CGCACACACA (8) 2 0.002 P4.5 retina GAATATGTTG (2) 2 0.002 P6.5 retina CACAAAATAA (10) 8.3 0.0083 P6.5 retina ATTCCGAATT (107) 3.3 0.0033 P6.5 retina CACACATACA (9) 3.3 0.0033 P6.5 retina CCCTTTTGAA (3) 1.7 0.0017 P6.5 retina GAATATGTTG (2) 1.7 0.0017 P10.5 crx- retina CGCACACACA (8) 7.4 0.0074 P10.5 crx- retina CACAAAATAA (10) 5.6 0.0056 P10.5 crx- retina CACACATACA (9) 1.9 0.0019 P10.5 crx+ retina CACAAAATAA (10) 7.7 0.0077 P10.5 crx+ retina CGCACACACA (8) 3.8 0.0038 P10.5 crx+ retina CACACATACA (9) 1.9 0.0019 Adult retinal CGCACACACA (8) 3.7 0.0037 Adult retinal AAGAAAAAGC (6) 1.9 0.0019 Adult retinal ACCAAGGTAA (4) 1.9 0.0019 Adult retinal CACAAAATAA (10) 1.9 0.0019 Adult retinal CACACATACA (9) 1.9 0.0019 Adult retinal CCCTTTTGAA (3) 1.9 0.0019 Adult retinal CTCTGTGAAT (8) 1.9 0.0019 Adult retinal GCTCAAGTCA (2) 1.9 0.0019 ONL CACAAAATAA (10) 5.7 0.0057 ONL ATTCCGAATT (107) 3.8 0.0038 ONL ACCAAGGTAA (4) 1.9 0.0019 ONL CACACATACA (9) 1.9 0.0019 ONL GAATATGTTG (2) 1.9 0.0019