Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.12831	3830421F13Rik	RIKEN cDNA 3830421F13 gene	16		69823
Human Homolog	DKFZp761B1514[hypothetical protein DKFZp761B1514]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 103 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (658) 203.9 0.2039 P8 Cb GC GTGACTCACA (25) 14.7 0.0147 P8 Cb GC TGAAACCTGT (2) 6.5 0.0065 P8 Cb GC AACATTGATA (3) 1.6 0.0016 P8 Cb GC GGTATAATTG 1.6 0.0016 P8 Cb GC TACAGCCCCT 1.6 0.0016 Cb medulloblastoma AAAAAAAAAA (658) 797.8 0.7978 Cb medulloblastoma GTGACTCACA (25) 25.4 0.0254 Cb medulloblastoma TACAGCCCCT 4.6 0.0046 Cb medulloblastoma AAAAAAAACA (13) 2.3 0.0023 Cb medulloblastoma GGTATAATTG 2.3 0.0023 P8 GC+1d culture AAAAAAAAAA (658) 204.3 0.2043 P8 GC+1d culture GTGACTCACA (25) 14.8 0.0148 P8 GC+1d culture GGAACAATAA (2) 2.3 0.0023 P8 GC+1d culture AACACTATCT (3) 1.1 0.0011 P8 GC+1d culture TCTTATAATT (5) 1.1 0.0011 P8 GC+SHH+1d culture AAAAAAAAAA (658) 278.7 0.2787 P8 GC+SHH+1d culture GTGACTCACA (25) 16.4 0.0164 P8 GC+SHH+1d culture AACATTGATA (3) 3.5 0.0035 P8 GC+SHH+1d culture AGTTATTCTG (2) 2.3 0.0023 P8 GC+SHH+1d culture TACAGCCCCT 2.3 0.0023 P8 GC+SHH+1d culture AACACTATCT (3) 1.2 0.0012 P8 GC+SHH+1d culture TGAAACCTGT (2) 1.2 0.0012 3T3 fibroblasts GTGACTCACA (25) 35 0.035 3T3 fibroblasts AAAAAAAAAA (658) 28 0.028 3T3 fibroblasts TACAGCCCCT 3.5 0.0035 E15 cortex AAAAAAAAAA (658) 212.8 0.2128 E15 cortex GTGACTCACA (25) 19.8 0.0198 P1 cortex AAAAAAAAAA (658) 245.4 0.2454 P1 cortex GTGACTCACA (25) 13.6 0.0136 P1 cortex TGAAACCTGT (2) 4.5 0.0045 Hypothalamus AAAAAAAAAA (658) 123.2 0.1232 Hypothalamus GTGACTCACA (25) 21.7 0.0217 Hypothalamus TGAAACCTGT (2) 3.6 0.0036 Hypothalamus AACATTGATA (3) 1.8 0.0018 Hypothalamus AGTTATTCTG (2) 1.8 0.0018 Hypothalamus GGAACAATAA (2) 1.8 0.0018 E12.5 retina AAAAAAAAAA (658) 138.9 0.1389 E12.5 retina GTGACTCACA (25) 35.7 0.0357 E12.5 retina TGAAACCTGT (2) 15 0.015 E12.5 retina AGTTATTCTG (2) 1.9 0.0019 E12.5 retina TACAGCCCCT 1.9 0.0019 E14.5 retina AAAAAAAAAA (658) 94.7 0.0947 E14.5 retina GTGACTCACA (25) 45.5 0.0455 E14.5 retina AACATTGATA (3) 5.5 0.0055 E14.5 retina GGAACAATAA (2) 1.8 0.0018 E16.5 retina AAAAAAAAAA (658) 43.5 0.0435 E16.5 retina GTGACTCACA (25) 29 0.029 E16.5 retina TGAAACCTGT (2) 5.4 0.0054 E16.5 retina AAAAAAAACA (13) 1.8 0.0018 E16.5 retina AGTTATTCTG (2) 1.8 0.0018 E16.5 retina GGAACAATAA (2) 1.8 0.0018 E16.5 retina TCTTATAATT (5) 1.8 0.0018 E18.5 retina AAAAAAAAAA (658) 374.7 0.3747 E18.5 retina GTGACTCACA (25) 27.3 0.0273 E18.5 retina TGAAACCTGT (2) 3.6 0.0036 E18.5 retina AAAAAAAACA (13) 1.8 0.0018 E18.5 retina GGTATAATTG 1.8 0.0018 E18.5 retina TACAGCCCCT 1.8 0.0018 P0.5 retina AAAAAAAAAA (658) 117.8 0.1178 P0.5 retina GTGACTCACA (25) 29.4 0.0294 P0.5 retina TGAAACCTGT (2) 7.9 0.0079 P0.5 retina AACACTATCT (3) 2 0.002 P0.5 retina AGTTATTCTG (2) 2 0.002 P2.5 retina AAAAAAAAAA (658) 329.1 0.3291 P2.5 retina GTGACTCACA (25) 24.6 0.0246 P2.5 retina AACACTATCT (3) 1.8 0.0018 P2.5 retina AACATTGATA (3) 1.8 0.0018 P2.5 retina AGTTATTCTG (2) 1.8 0.0018 P2.5 retina TCTTATAATT (5) 1.8 0.0018 P2.5 retina TGAAACCTGT (2) 1.8 0.0018 P4.5 retina AAAAAAAAAA (658) 283.3 0.2833 P4.5 retina GTGACTCACA (25) 27.7 0.0277 P4.5 retina TGAAACCTGT (2) 5.9 0.0059 P4.5 retina AACATTGATA (3) 4 0.004 P4.5 retina TACAGCCCCT 4 0.004 P4.5 retina AAAAAAAACA (13) 2 0.002 P4.5 retina AGTTATTCTG (2) 2 0.002 P6.5 retina AAAAAAAAAA (658) 266.8 0.2668 P6.5 retina GTGACTCACA (25) 26.7 0.0267 P6.5 retina AGTTATTCTG (2) 10 0.01 P6.5 retina TGAAACCTGT (2) 3.3 0.0033 P10.5 crx- retina AAAAAAAAAA (658) 44.6 0.0446 P10.5 crx- retina GTGACTCACA (25) 26 0.026 P10.5 crx- retina TGAAACCTGT (2) 9.3 0.0093 P10.5 crx- retina TACAGCCCCT 3.7 0.0037 P10.5 crx- retina AACATTGATA (3) 1.9 0.0019 P10.5 crx- retina AGTTATTCTG (2) 1.9 0.0019 P10.5 crx+ retina AAAAAAAAAA (658) 96.1 0.0961 P10.5 crx+ retina GTGACTCACA (25) 30.8 0.0308 P10.5 crx+ retina AGTTATTCTG (2) 3.8 0.0038 P10.5 crx+ retina TGAAACCTGT (2) 3.8 0.0038 P10.5 crx+ retina AAAAAAAACA (13) 1.9 0.0019 P10.5 crx+ retina TACAGCCCCT 1.9 0.0019 Adult retinal AAAAAAAAAA (658) 57.4 0.0574 Adult retinal GTGACTCACA (25) 33.3 0.0333 Adult retinal TGAAACCTGT (2) 5.6 0.0056 Adult retinal AGTTATTCTG (2) 1.9 0.0019 ONL AAAAAAAAAA (658) 103.4 0.1034 ONL GTGACTCACA (25) 34.5 0.0345 ONL AAAAAAAACA (13) 1.9 0.0019 ONL AGTTATTCTG (2) 1.9 0.0019 ONL TGAAACCTGT (2) 1.9 0.0019