Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.12932	Blm	Bloom syndrome homolog (human)	7	7 40.0 cM	12144
Gene Ontology	ATP binding | ATP dependent helicase activity | DNA binding | DNA metabolism | DNA replication | helicase activity | hydrolase activity | intracellular | nucleic acid binding | nucleus
Human Homolog	BLM[Bloom syndrome]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 40 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TAAAAAAAAA (196) 47.3 0.0473 P8 Cb GC TGATAGTTCT (2) 3.3 0.0033 Cb medulloblastoma TAAAAAAAAA (196) 106.4 0.1064 Cb medulloblastoma TAGTAGAGCC (5) 2.3 0.0023 P8 GC+1d culture TAAAAAAAAA (196) 66.2 0.0662 P8 GC+1d culture AGACCCTCTC (6) 3.4 0.0034 P8 GC+SHH+1d culture TAAAAAAAAA (196) 93.7 0.0937 P8 GC+SHH+1d culture AGACCCTCTC (6) 5.9 0.0059 P8 GC+SHH+1d culture TGATAGTTCT (2) 2.3 0.0023 3T3 fibroblasts TAAAAAAAAA (196) 7 0.007 3T3 fibroblasts AGACCCTCTC (6) 3.5 0.0035 E15 cortex TAAAAAAAAA (196) 9.9 0.0099 E15 cortex AGACCCTCTC (6) 4.9 0.0049 P1 cortex TAAAAAAAAA (196) 50 0.05 Hypothalamus TAAAAAAAAA (196) 32.6 0.0326 Hypothalamus AGACCCTCTC (6) 1.8 0.0018 E12.5 retina TAAAAAAAAA (196) 24.4 0.0244 E12.5 retina TGATAGTTCT (2) 3.8 0.0038 E14.5 retina TAAAAAAAAA (196) 41.9 0.0419 E14.5 retina TAGTAGAGCC (5) 1.8 0.0018 E14.5 retina TGATAGTTCT (2) 1.8 0.0018 E16.5 retina TAAAAAAAAA (196) 23.5 0.0235 E18.5 retina TAAAAAAAAA (196) 107.3 0.1073 E18.5 retina TGATAGTTCT (2) 7.3 0.0073 E18.5 retina TAGTAGAGCC (5) 1.8 0.0018 P0.5 retina TAAAAAAAAA (196) 37.3 0.0373 P0.5 retina AGACCCTCTC (6) 3.9 0.0039 P2.5 retina TAAAAAAAAA (196) 72.2 0.0722 P2.5 retina TGATAGTTCT (2) 7 0.007 P4.5 retina TAAAAAAAAA (196) 122.8 0.1228 P4.5 retina TGATAGTTCT (2) 2 0.002 P6.5 retina TAAAAAAAAA (196) 63.4 0.0634 P6.5 retina TGATAGTTCT (2) 5 0.005 P10.5 crx- retina TAAAAAAAAA (196) 9.3 0.0093 P10.5 crx- retina TGATAGTTCT (2) 3.7 0.0037 P10.5 crx- retina TAGTAGAGCC (5) 1.9 0.0019 P10.5 crx+ retina TAAAAAAAAA (196) 25 0.025 Adult retinal TAAAAAAAAA (196) 18.5 0.0185 Adult retinal AGACCCTCTC (6) 5.6 0.0056 ONL TAAAAAAAAA (196) 28.7 0.0287