Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.130002	Ttc9	tetratricopeptide repeat domain 9	12		69480
Human Homolog	TTC9[tetratricopeptide repeat domain 9]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 31 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TATTTTTCGT 3.3 0.0033 P8 Cb GC CGTTTGTAGA (2) 1.6 0.0016 P8 Cb GC GCTCTGGAGA (8) 1.6 0.0016 Cb medulloblastoma CGTTTGTAGA (2) 6.9 0.0069 P8 GC+1d culture CGTTTGTAGA (2) 1.1 0.0011 P8 GC+1d culture TTGCCAATAC 1.1 0.0011 P8 GC+SHH+1d culture TATTTTTCGT 1.2 0.0012 P8 GC+SHH+1d culture TTGCCAATAC 1.2 0.0012 3T3 fibroblasts CGTTTGTAGA (2) 3.5 0.0035 E15 cortex GCTCTGGAGA (8) 4.9 0.0049 Hypothalamus CGTTTGTAGA (2) 1.8 0.0018 Hypothalamus TTGCCAATAC 1.8 0.0018 E12.5 retina CGTTTGTAGA (2) 1.9 0.0019 E14.5 retina CGTTTGTAGA (2) 3.6 0.0036 E14.5 retina TATTTTTCGT 1.8 0.0018 E16.5 retina TTGCCAATAC 1.8 0.0018 E18.5 retina CGTTTGTAGA (2) 3.6 0.0036 P0.5 retina TATTTTTCGT 2 0.002 P0.5 retina TTGCCAATAC 2 0.002 P2.5 retina TATTTTTCGT 5.3 0.0053 P2.5 retina CGTTTGTAGA (2) 1.8 0.0018 P2.5 retina TTGCCAATAC 1.8 0.0018 P6.5 retina CGTTTGTAGA (2) 1.7 0.0017 P6.5 retina GCTCTGGAGA (8) 1.7 0.0017 P10.5 crx- retina TATTTTTCGT 5.6 0.0056 P10.5 crx- retina TTGCCAATAC 3.7 0.0037 P10.5 crx- retina CGTTTGTAGA (2) 1.9 0.0019 P10.5 crx+ retina CGTTTGTAGA (2) 3.8 0.0038 Adult retinal CGTTTGTAGA (2) 1.9 0.0019 Adult retinal TTGCCAATAC 1.9 0.0019 ONL CGTTTGTAGA (2) 1.9 0.0019