Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.130227	9230118H08Rik	RIKEN cDNA 9230118H08 gene			77911
Mm.130227	Flot2	flotillin 2	11	11 46.0 cM	14252
Gene Ontology	cell adhesion | flotillin complex | integral to membrane | lipid raft | membrane | protein binding
Human Homolog	FLOT2[flotillin 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 92 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTTTAATCC (355) 52.2 0.0522 P8 Cb GC GGAGACACCA (3) 3.3 0.0033 P8 Cb GC TCTGGTCCGG (2) 3.3 0.0033 P8 Cb GC AAGGAGAAGG (9) 1.6 0.0016 P8 Cb GC CCTTTAATTC (36) 1.6 0.0016 P8 Cb GC GAGCAGAGGA (8) 1.6 0.0016 Cb medulloblastoma CCTTTAATCC (355) 41.6 0.0416 Cb medulloblastoma TCTGGTCCGG (2) 6.9 0.0069 Cb medulloblastoma CCTTTAATTC (36) 4.6 0.0046 P8 GC+1d culture CCTTTAATCC (355) 32 0.032 P8 GC+1d culture TCTGGTCCGG (2) 10.3 0.0103 P8 GC+1d culture GAGCAGAGGA (8) 6.8 0.0068 P8 GC+1d culture TGCCTGTCTG (6) 5.7 0.0057 P8 GC+1d culture AAGGAGAAGG (9) 2.3 0.0023 P8 GC+1d culture GGAGACACCA (3) 2.3 0.0023 P8 GC+SHH+1d culture CCTTTAATCC (355) 25.8 0.0258 P8 GC+SHH+1d culture TCTGGTCCGG (2) 11.7 0.0117 P8 GC+SHH+1d culture CCTTTAATTC (36) 7 0.007 P8 GC+SHH+1d culture AAGGAGAAGG (9) 3.5 0.0035 P8 GC+SHH+1d culture GAGCAGAGGA (8) 2.3 0.0023 P8 GC+SHH+1d culture TGCCTGTCTG (6) 1.2 0.0012 3T3 fibroblasts CCTTTAATCC (355) 70.1 0.0701 3T3 fibroblasts CCTTTAATTC (36) 7 0.007 3T3 fibroblasts TCTGGTCCGG (2) 7 0.007 3T3 fibroblasts GGAGACACCA (3) 3.5 0.0035 E15 cortex CCTTTAATCC (355) 54.4 0.0544 E15 cortex GGAGACACCA (3) 4.9 0.0049 P1 cortex CCTTTAATCC (355) 154.5 0.1545 P1 cortex CCTTTAATTC (36) 13.6 0.0136 P1 cortex GTGGGAAGAG (5) 4.5 0.0045 Hypothalamus CCTTTAATCC (355) 19.9 0.0199 Hypothalamus TCTGGTCCGG (2) 9.1 0.0091 Hypothalamus GAGCAGAGGA (8) 1.8 0.0018 E12.5 retina CCTTTAATCC (355) 75.1 0.0751 E12.5 retina CCTTTAATTC (36) 3.8 0.0038 E12.5 retina GAGCAGAGGA (8) 3.8 0.0038 E12.5 retina GGAGACACCA (3) 3.8 0.0038 E12.5 retina TGCCTGTCTG (6) 1.9 0.0019 E14.5 retina CCTTTAATCC (355) 120.3 0.1203 E14.5 retina CCTTTAATTC (36) 7.3 0.0073 E14.5 retina AAGGAGAAGG (9) 1.8 0.0018 E14.5 retina CAGAACAGCT (12) 1.8 0.0018 E14.5 retina GTGGGAAGAG (5) 1.8 0.0018 E14.5 retina TGCCTGTCTG (6) 1.8 0.0018 E16.5 retina CCTTTAATCC (355) 68.8 0.0688 E16.5 retina AAGGAGAAGG (9) 3.6 0.0036 E16.5 retina CCTTTAATTC (36) 3.6 0.0036 E16.5 retina TCTGGTCCGG (2) 3.6 0.0036 E16.5 retina TGCCTGTCTG (6) 3.6 0.0036 E16.5 retina GGAGACACCA (3) 1.8 0.0018 E18.5 retina CCTTTAATCC (355) 23.6 0.0236 E18.5 retina TCTGGTCCGG (2) 5.5 0.0055 E18.5 retina CCTTTAATTC (36) 1.8 0.0018 P0.5 retina CCTTTAATCC (355) 72.6 0.0726 P0.5 retina CCTTTAATTC (36) 5.9 0.0059 P0.5 retina TCTGGTCCGG (2) 2 0.002 P0.5 retina TGCCTGTCTG (6) 2 0.002 P2.5 retina CCTTTAATCC (355) 70.4 0.0704 P2.5 retina TCTGGTCCGG (2) 8.8 0.0088 P2.5 retina TGCCTGTCTG (6) 5.3 0.0053 P2.5 retina AAGGAGAAGG (9) 1.8 0.0018 P2.5 retina CCTTTAATTC (36) 1.8 0.0018 P2.5 retina GTGGGAAGAG (5) 1.8 0.0018 P4.5 retina CCTTTAATCC (355) 43.6 0.0436 P4.5 retina TCTGGTCCGG (2) 5.9 0.0059 P4.5 retina TGCCTGTCTG (6) 5.9 0.0059 P4.5 retina CCTTTAATTC (36) 4 0.004 P4.5 retina CAGAACAGCT (12) 2 0.002 P6.5 retina CCTTTAATCC (355) 70 0.07 P6.5 retina TCTGGTCCGG (2) 8.3 0.0083 P6.5 retina CCTTTAATTC (36) 5 0.005 P6.5 retina TGCCTGTCTG (6) 3.3 0.0033 P6.5 retina GAGCAGAGGA (8) 1.7 0.0017 P6.5 retina GTGGGAAGAG (5) 1.7 0.0017 P10.5 crx- retina CCTTTAATCC (355) 63.2 0.0632 P10.5 crx- retina TCTGGTCCGG (2) 5.6 0.0056 P10.5 crx- retina CCTTTAATTC (36) 1.9 0.0019 P10.5 crx- retina TGCCTGTCTG (6) 1.9 0.0019 P10.5 crx+ retina CCTTTAATCC (355) 38.4 0.0384 P10.5 crx+ retina TCTGGTCCGG (2) 5.8 0.0058 P10.5 crx+ retina TGCCTGTCTG (6) 5.8 0.0058 P10.5 crx+ retina AAGGAGAAGG (9) 1.9 0.0019 Adult retinal CCTTTAATCC (355) 129.6 0.1296 Adult retinal CCTTTAATTC (36) 1.9 0.0019 Adult retinal GGAGACACCA (3) 1.9 0.0019 Adult retinal TCTGGTCCGG (2) 1.9 0.0019 Adult retinal TGCCTGTCTG (6) 1.9 0.0019 ONL CCTTTAATCC (355) 84.3 0.0843 ONL CCTTTAATTC (36) 3.8 0.0038 ONL CAGAACAGCT (12) 1.9 0.0019 ONL TCTGGTCCGG (2) 1.9 0.0019 ONL TGCCTGTCTG (6) 1.9 0.0019