Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.130362
Top2b
topoisomerase (DNA) II beta
14
21974
Mm.130362
D230016L12Rik
RIKEN cDNA D230016L12 gene
14
319393
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 90 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
ATTGCAGACT
(
3
)
53.8
0.0538
P8 Cb GC
ACATTTCAAT (
4
)
3.3
0.0033
P8 Cb GC
GCCAAGTCCA
(
8
)
1.6
0.0016
Cb medulloblastoma
ATTGCAGACT
(
3
)
18.5
0.0185
Cb medulloblastoma
ACATTTCAAT (
4
)
4.6
0.0046
Cb medulloblastoma
ACTAAAAAAA (
2
)
2.3
0.0023
Cb medulloblastoma
ACTGTAAAAA (
5
)
2.3
0.0023
Cb medulloblastoma
TAAATAAAGG
(
3
)
2.3
0.0023
P8 GC+1d culture
ATTGCAGACT
(
3
)
38.8
0.0388
P8 GC+1d culture
ACATTTCAAT (
4
)
11.4
0.0114
P8 GC+1d culture
ACTAAAAAAA (
2
)
1.1
0.0011
P8 GC+1d culture
ATGACAGTTC
(
2
)
1.1
0.0011
P8 GC+1d culture
GAGTCTCCTG
(
7
)
1.1
0.0011
P8 GC+1d culture
GCCAAGTCCA
(
8
)
1.1
0.0011
P8 GC+1d culture
TGCTGTCTGA (
4
)
1.1
0.0011
P8 GC+SHH+1d culture
ATTGCAGACT
(
3
)
24.6
0.0246
P8 GC+SHH+1d culture
ACATTTCAAT (
4
)
3.5
0.0035
P8 GC+SHH+1d culture
TAAATAAAGG
(
3
)
3.5
0.0035
P8 GC+SHH+1d culture
ATGACAGTTC
(
2
)
2.3
0.0023
P8 GC+SHH+1d culture
GAGTCTCCTG
(
7
)
1.2
0.0012
P8 GC+SHH+1d culture
GCCAAGTCCA
(
8
)
1.2
0.0012
3T3 fibroblasts
ATTGCAGACT
(
3
)
3.5
0.0035
3T3 fibroblasts
TGCTGTCTGA (
4
)
3.5
0.0035
E15 cortex
GCCAAGTCCA
(
8
)
14.8
0.0148
E15 cortex
ATTGCAGACT
(
3
)
9.9
0.0099
E15 cortex
GAGTCTCCTG
(
7
)
4.9
0.0049
P1 cortex
ACATTTCAAT (
4
)
13.6
0.0136
P1 cortex
ATTGCAGACT
(
3
)
4.5
0.0045
P1 cortex
TGCTGTCTGA (
4
)
4.5
0.0045
Hypothalamus
ACATTTCAAT (
4
)
19.9
0.0199
Hypothalamus
TTAATGCTGG
(
3
)
5.4
0.0054
Hypothalamus
ACTAAAAAAA (
2
)
1.8
0.0018
Hypothalamus
ATGACAGTTC
(
2
)
1.8
0.0018
Hypothalamus
GCCAAGTCCA
(
8
)
1.8
0.0018
E12.5 retina
ATTGCAGACT
(
3
)
13.1
0.0131
E12.5 retina
GAGTCTCCTG
(
7
)
5.6
0.0056
E12.5 retina
GCCAAGTCCA
(
8
)
3.8
0.0038
E12.5 retina
ACATTTCAAT (
4
)
1.9
0.0019
E12.5 retina
TAAATAAAGG
(
3
)
1.9
0.0019
E14.5 retina
ATTGCAGACT
(
3
)
10.9
0.0109
E14.5 retina
ACATTTCAAT (
4
)
3.6
0.0036
E14.5 retina
GAGTCTCCTG
(
7
)
3.6
0.0036
E14.5 retina
TAAATAAAGG
(
3
)
3.6
0.0036
E16.5 retina
ATTGCAGACT
(
3
)
16.3
0.0163
E16.5 retina
ACATTTCAAT (
4
)
5.4
0.0054
E16.5 retina
ACTAAAAAAA (
2
)
3.6
0.0036
E16.5 retina
GCCAAGTCCA
(
8
)
3.6
0.0036
E16.5 retina
TAAATAAAGG
(
3
)
1.8
0.0018
E18.5 retina
ATTGCAGACT
(
3
)
27.3
0.0273
E18.5 retina
ACATTTCAAT (
4
)
9.1
0.0091
E18.5 retina
GAGTCTCCTG
(
7
)
9.1
0.0091
E18.5 retina
ACTAAAAAAA (
2
)
1.8
0.0018
E18.5 retina
ACTGTAAAAA (
5
)
1.8
0.0018
P0.5 retina
ATTGCAGACT
(
3
)
21.6
0.0216
P0.5 retina
GAGTCTCCTG
(
7
)
7.9
0.0079
P0.5 retina
ACTAAAAAAA (
2
)
3.9
0.0039
P0.5 retina
ACATTTCAAT (
4
)
2
0.002
P2.5 retina
ATTGCAGACT
(
3
)
26.4
0.0264
P2.5 retina
GAGTCTCCTG
(
7
)
5.3
0.0053
P2.5 retina
TAAATAAAGG
(
3
)
5.3
0.0053
P2.5 retina
GCCAAGTCCA
(
8
)
3.5
0.0035
P2.5 retina
ACATTTCAAT (
4
)
1.8
0.0018
P4.5 retina
ATTGCAGACT
(
3
)
33.7
0.0337
P4.5 retina
ACATTTCAAT (
4
)
9.9
0.0099
P4.5 retina
TAAATAAAGG
(
3
)
2
0.002
P6.5 retina
ATTGCAGACT
(
3
)
25
0.025
P6.5 retina
GAGTCTCCTG
(
7
)
5
0.005
P6.5 retina
ACATTTCAAT (
4
)
3.3
0.0033
P6.5 retina
TAAATAAAGG
(
3
)
3.3
0.0033
P6.5 retina
ATGACAGTTC
(
2
)
1.7
0.0017
P6.5 retina
TGCTGTCTGA (
4
)
1.7
0.0017
P10.5 crx- retina
ATTGCAGACT
(
3
)
35.3
0.0353
P10.5 crx- retina
ACATTTCAAT (
4
)
11.1
0.0111
P10.5 crx- retina
ACTGTAAAAA (
5
)
1.9
0.0019
P10.5 crx- retina
GAGTCTCCTG
(
7
)
1.9
0.0019
P10.5 crx+ retina
ATTGCAGACT
(
3
)
44.2
0.0442
P10.5 crx+ retina
ACATTTCAAT (
4
)
13.5
0.0135
P10.5 crx+ retina
GAGTCTCCTG
(
7
)
1.9
0.0019
P10.5 crx+ retina
TAAATAAAGG
(
3
)
1.9
0.0019
Adult retinal
ATTGCAGACT
(
3
)
14.8
0.0148
Adult retinal
GAGTCTCCTG
(
7
)
3.7
0.0037
Adult retinal
ACATTTCAAT (
4
)
1.9
0.0019
Adult retinal
ATGACAGTTC
(
2
)
1.9
0.0019
Adult retinal
TAAATAAAGG
(
3
)
1.9
0.0019
Adult retinal
TGCTGTCTGA (
4
)
1.9
0.0019
ONL
ACATTTCAAT (
4
)
21.1
0.0211
ONL
ATTGCAGACT
(
3
)
19.2
0.0192
ONL
TAAATAAAGG
(
3
)
3.8
0.0038
ONL
TGCTGTCTGA (
4
)
3.8
0.0038
ONL
GAGTCTCCTG
(
7
)
1.9
0.0019
