Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.130656
Rab11fip4
RAB11 family interacting protein 4 (class II)
11
11 46.15 cM
268451
Human Homolog
RAB11FIP4[RAB11 family interacting protein 4 (class II)]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 56 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CAAAAAAAAA (
157
)
47.3
0.0473
P8 Cb GC
CAGATGAGGC (
7
)
1.6
0.0016
P8 Cb GC
CGCTTGACGA
1.6
0.0016
P8 Cb GC
GGAGCTGAAG
(
5
)
1.6
0.0016
Cb medulloblastoma
CAAAAAAAAA (
157
)
92.5
0.0925
Cb medulloblastoma
CAGATGAGGC (
7
)
2.3
0.0023
Cb medulloblastoma
GGAGCTGAAG
(
5
)
2.3
0.0023
Cb medulloblastoma
TTTGCTGTTT (
6
)
2.3
0.0023
P8 GC+1d culture
CAAAAAAAAA (
157
)
37.7
0.0377
P8 GC+1d culture
GGGCTGGGCC
(
2
)
6.8
0.0068
P8 GC+SHH+1d culture
CAAAAAAAAA (
157
)
58.5
0.0585
P8 GC+SHH+1d culture
GGGCTGGGCC
(
2
)
5.9
0.0059
E15 cortex
CAAAAAAAAA (
157
)
34.6
0.0346
E15 cortex
GGGCTGGGCC
(
2
)
14.8
0.0148
P1 cortex
CAAAAAAAAA (
157
)
22.7
0.0227
P1 cortex
GGGCTGGGCC
(
2
)
18.2
0.0182
Hypothalamus
CAAAAAAAAA (
157
)
39.8
0.0398
Hypothalamus
GCTGTGGGTG
(
4
)
1.8
0.0018
Hypothalamus
GGAGCTGAAG
(
5
)
1.8
0.0018
Hypothalamus
GGGCTGGGCC
(
2
)
1.8
0.0018
E12.5 retina
CAAAAAAAAA (
157
)
22.5
0.0225
E12.5 retina
GGAGGTTCCA (
6
)
1.9
0.0019
E12.5 retina
GGGCTGGGCC
(
2
)
1.9
0.0019
E14.5 retina
CAAAAAAAAA (
157
)
9.1
0.0091
E14.5 retina
AAAAAAAACT
(
7
)
1.8
0.0018
E16.5 retina
CAAAAAAAAA (
157
)
9.1
0.0091
E16.5 retina
CGCTTGACGA
1.8
0.0018
E18.5 retina
CAAAAAAAAA (
157
)
41.8
0.0418
E18.5 retina
GGGCTGGGCC
(
2
)
5.5
0.0055
E18.5 retina
GGAGCTGAAG
(
5
)
3.6
0.0036
E18.5 retina
CAGATGAGGC (
7
)
1.8
0.0018
P0.5 retina
CAAAAAAAAA (
157
)
137.4
0.1374
P0.5 retina
GGGCTGGGCC
(
2
)
5.9
0.0059
P0.5 retina
CGCTTGACGA
2
0.002
P0.5 retina
GCTGTGGGTG
(
4
)
2
0.002
P2.5 retina
CAAAAAAAAA (
157
)
52.8
0.0528
P2.5 retina
GGGCTGGGCC
(
2
)
1.8
0.0018
P4.5 retina
CAAAAAAAAA (
157
)
41.6
0.0416
P4.5 retina
GGAGGTTCCA (
6
)
4
0.004
P4.5 retina
AAAAAAAACT
(
7
)
2
0.002
P4.5 retina
GCTGTGGGTG
(
4
)
2
0.002
P4.5 retina
GGGCTGGGCC
(
2
)
2
0.002
P4.5 retina
TTTGCTGTTT (
6
)
2
0.002
P6.5 retina
CAAAAAAAAA (
157
)
31.7
0.0317
P6.5 retina
GGGCTGGGCC
(
2
)
1.7
0.0017
P10.5 crx- retina
CAAAAAAAAA (
157
)
13
0.013
P10.5 crx- retina
GGAGCTGAAG
(
5
)
3.7
0.0037
P10.5 crx- retina
GGGCTGGGCC
(
2
)
1.9
0.0019
P10.5 crx+ retina
CAAAAAAAAA (
157
)
32.7
0.0327
P10.5 crx+ retina
GGAGCTGAAG
(
5
)
3.8
0.0038
P10.5 crx+ retina
GGGCTGGGCC
(
2
)
1.9
0.0019
Adult retinal
CAAAAAAAAA (
157
)
20.4
0.0204
Adult retinal
GGGCTGGGCC
(
2
)
1.9
0.0019
Adult retinal
TTTGCTGTTT (
6
)
1.9
0.0019
ONL
CAAAAAAAAA (
157
)
17.2
0.0172
ONL
GGAGCTGAAG
(
5
)
1.9
0.0019
