Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.130721	D6Mgi14	DNA Segment, Chr 6, Mouse Genome Informatics 14	6		101378
Mm.130721	5730601F06Rik	RIKEN cDNA 5730601F06 gene	9		77519
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 10 In Situ Hybridization Images

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SAGE Tags

Total 83 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAAAATACTG (3) 3.3 0.0033 P8 Cb GC TACCTTTTCT (2) 3.3 0.0033 P8 Cb GC TGCAGAAAGT (4) 1.6 0.0016 P8 Cb GC TGTAAAGCCC (3) 1.6 0.0016 P8 Cb GC TGTTTAAGTG (2) 1.6 0.0016 Cb medulloblastoma TACCTTTTCT (2) 6.9 0.0069 Cb medulloblastoma CAAAATACTG (3) 4.6 0.0046 Cb medulloblastoma TTGCCTCACA (2) 2.3 0.0023 P8 GC+1d culture CAAAATACTG (3) 5.7 0.0057 P8 GC+1d culture TACCTTTTCT (2) 5.7 0.0057 P8 GC+1d culture TAGAAGTAGA (2) 4.6 0.0046 P8 GC+1d culture AATTTGAGAG (8) 1.1 0.0011 P8 GC+1d culture TAAAAACTCA (3) 1.1 0.0011 P8 GC+1d culture TGTAAAGCCC (3) 1.1 0.0011 P8 GC+SHH+1d culture CAAAATACTG (3) 4.7 0.0047 P8 GC+SHH+1d culture TACCTTTTCT (2) 2.3 0.0023 P8 GC+SHH+1d culture TGTTTAAGTG (2) 2.3 0.0023 P8 GC+SHH+1d culture AATTTGAGAG (8) 1.2 0.0012 P8 GC+SHH+1d culture TGCGTGTGTG (16) 1.2 0.0012 P8 GC+SHH+1d culture TGTAAAGCCC (3) 1.2 0.0012 3T3 fibroblasts TGCGTGTGTG (16) 3.5 0.0035 3T3 fibroblasts TTGCCTCACA (2) 3.5 0.0035 E15 cortex TACCTTTTCT (2) 4.9 0.0049 E15 cortex TGGAAACCAG (5) 4.9 0.0049 P1 cortex TAGAAGTAGA (2) 9.1 0.0091 P1 cortex CAAAATACTG (3) 4.5 0.0045 P1 cortex TACCTTTTCT (2) 4.5 0.0045 Hypothalamus AGGTTCCTGA (4) 1.8 0.0018 Hypothalamus TACCTTTTCT (2) 1.8 0.0018 E12.5 retina AATTTGAGAG (8) 1.9 0.0019 E12.5 retina TAGAAGTAGA (2) 1.9 0.0019 E12.5 retina TGTAAAGCCC (3) 1.9 0.0019 E14.5 retina CAAAATACTG (3) 7.3 0.0073 E14.5 retina TGCGTGTGTG (16) 1.8 0.0018 E16.5 retina CAAAATACTG (3) 3.6 0.0036 E16.5 retina TAAAAACTCA (3) 3.6 0.0036 E16.5 retina TACATACCTG (2) 3.6 0.0036 E16.5 retina TACCTTTTCT (2) 3.6 0.0036 E18.5 retina TACCTTTTCT (2) 5.5 0.0055 E18.5 retina CAAAATACTG (3) 1.8 0.0018 E18.5 retina TGTTTAAGTG (2) 1.8 0.0018 P0.5 retina TACCTTTTCT (2) 3.9 0.0039 P0.5 retina CAAAATACTG (3) 2 0.002 P0.5 retina TAGAAGTAGA (2) 2 0.002 P0.5 retina TGCAGAAAGT (4) 2 0.002 P0.5 retina TGCGTGTGTG (16) 2 0.002 P2.5 retina TACCTTTTCT (2) 14.1 0.0141 P2.5 retina CAAAATACTG (3) 7 0.007 P2.5 retina TAGAAGTAGA (2) 5.3 0.0053 P2.5 retina TACATACCTG (2) 3.5 0.0035 P2.5 retina TGCGTGTGTG (16) 1.8 0.0018 P2.5 retina TGTTTAAGTG (2) 1.8 0.0018 P4.5 retina CAAAATACTG (3) 7.9 0.0079 P4.5 retina TACCTTTTCT (2) 5.9 0.0059 P4.5 retina TAGAAGTAGA (2) 4 0.004 P4.5 retina AATTTGAGAG (8) 2 0.002 P4.5 retina TGCAGAAAGT (4) 2 0.002 P4.5 retina TGGAAACCAG (5) 2 0.002 P6.5 retina CAAAATACTG (3) 8.3 0.0083 P6.5 retina TACCTTTTCT (2) 5 0.005 P6.5 retina TGTAAAGCCC (3) 3.3 0.0033 P6.5 retina AATTTGAGAG (8) 1.7 0.0017 P6.5 retina TAGAAGTAGA (2) 1.7 0.0017 P6.5 retina TGCGTGTGTG (16) 1.7 0.0017 P6.5 retina TGTTTAAGTG (2) 1.7 0.0017 P6.5 retina TTGCCTCACA (2) 1.7 0.0017 P10.5 crx- retina CAAAATACTG (3) 7.4 0.0074 P10.5 crx- retina TACCTTTTCT (2) 3.7 0.0037 P10.5 crx- retina AGGTTCCTGA (4) 1.9 0.0019 P10.5 crx- retina TAAAAACTCA (3) 1.9 0.0019 P10.5 crx+ retina CAAAATACTG (3) 9.6 0.0096 P10.5 crx+ retina TACATACCTG (2) 1.9 0.0019 P10.5 crx+ retina TACCTTTTCT (2) 1.9 0.0019 P10.5 crx+ retina TGGAAACCAG (5) 1.9 0.0019 P10.5 crx+ retina TGTTTAAGTG (2) 1.9 0.0019 Adult retinal CAAAATACTG (3) 5.6 0.0056 Adult retinal TGTAAAGCCC (3) 3.7 0.0037 ONL AATTTGAGAG (8) 1.9 0.0019 ONL AGGTTCCTGA (4) 1.9 0.0019 ONL CAAAATACTG (3) 1.9 0.0019 ONL TAGAAGTAGA (2) 1.9 0.0019 ONL TGCGTGTGTG (16) 1.9 0.0019 ONL TGTAAAGCCC (3) 1.9 0.0019