Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.132237
Mapre2
microtubule-associated protein, RP/EB family, member 2
18
18 A2 (18 7.0 cM)
212307
Mm.132237
C820009F03Rik
RIKEN cDNA C820009F03 gene
18
319531
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 170 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CACCACCACA (
14
)
55.5
0.0555
P8 Cb GC
GTAGGATAGC
(
2
)
9.8
0.0098
P8 Cb GC
TAAAATAAAA (
14
)
8.2
0.0082
P8 Cb GC
CCCTTCCCTT (
9
)
4.9
0.0049
P8 Cb GC
GATGCTTTGG (
6
)
3.3
0.0033
P8 Cb GC
TCTGAAAAAA (
10
)
3.3
0.0033
P8 Cb GC
GCAGAGACAG (
5
)
1.6
0.0016
P8 Cb GC
GGGAAACAGT
(
3
)
1.6
0.0016
P8 Cb GC
GTAAAAAAAG
(
6
)
1.6
0.0016
P8 Cb GC
GTTTCAAGAG
(
4
)
1.6
0.0016
Cb medulloblastoma
GTAGGATAGC
(
2
)
30.1
0.0301
Cb medulloblastoma
TAAAATAAAA (
14
)
18.5
0.0185
Cb medulloblastoma
TCTGAAAAAA (
10
)
16.2
0.0162
Cb medulloblastoma
CACCACCACA (
14
)
9.2
0.0092
Cb medulloblastoma
GCGTTGGTCT (
3
)
6.9
0.0069
Cb medulloblastoma
CCAATCTGTG (
4
)
2.3
0.0023
Cb medulloblastoma
GATGCTTTGG (
6
)
2.3
0.0023
Cb medulloblastoma
GTTTCAAGAG
(
4
)
2.3
0.0023
P8 GC+1d culture
CACCACCACA (
14
)
50.2
0.0502
P8 GC+1d culture
CCCTTCCCTT (
9
)
14.8
0.0148
P8 GC+1d culture
TAAAATAAAA (
14
)
12.6
0.0126
P8 GC+1d culture
GCGTTGGTCT (
3
)
9.1
0.0091
P8 GC+1d culture
GTAGGATAGC
(
2
)
8
0.008
P8 GC+1d culture
GATGCTTTGG (
6
)
4.6
0.0046
P8 GC+1d culture
TCTGAAAAAA (
10
)
4.6
0.0046
P8 GC+1d culture
ACCAGCAGCC
(
5
)
1.1
0.0011
P8 GC+1d culture
CCAATCTGTG (
4
)
1.1
0.0011
P8 GC+1d culture
CCTTTCAGTC (
7
)
1.1
0.0011
P8 GC+1d culture
GTTTCAAGAG
(
4
)
1.1
0.0011
P8 GC+SHH+1d culture
CACCACCACA (
14
)
30.4
0.0304
P8 GC+SHH+1d culture
CCCTTCCCTT (
9
)
17.6
0.0176
P8 GC+SHH+1d culture
TAAAATAAAA (
14
)
8.2
0.0082
P8 GC+SHH+1d culture
GCGTTGGTCT (
3
)
5.9
0.0059
P8 GC+SHH+1d culture
TCTGAAAAAA (
10
)
4.7
0.0047
P8 GC+SHH+1d culture
GTAGGATAGC
(
2
)
3.5
0.0035
P8 GC+SHH+1d culture
GTTTCAAGAG
(
4
)
2.3
0.0023
P8 GC+SHH+1d culture
CCAATCTGTG (
4
)
1.2
0.0012
3T3 fibroblasts
CACCACCACA (
14
)
287.4
0.2874
3T3 fibroblasts
GCGTTGGTCT (
3
)
17.5
0.0175
3T3 fibroblasts
ACCAGCAGCC
(
5
)
3.5
0.0035
3T3 fibroblasts
CCAATCTGTG (
4
)
3.5
0.0035
3T3 fibroblasts
CCCTTCCCTT (
9
)
3.5
0.0035
3T3 fibroblasts
CCTTTCAGTC (
7
)
3.5
0.0035
3T3 fibroblasts
GCAGAGACAG (
5
)
3.5
0.0035
3T3 fibroblasts
GTTTCAAGAG
(
4
)
3.5
0.0035
E15 cortex
CACCACCACA (
14
)
34.6
0.0346
E15 cortex
CCCTTCCCTT (
9
)
24.7
0.0247
E15 cortex
GTAGGATAGC
(
2
)
19.8
0.0198
E15 cortex
CCAATCTGTG (
4
)
9.9
0.0099
E15 cortex
GGGAAACAGT
(
3
)
4.9
0.0049
E15 cortex
GTTTCAAGAG
(
4
)
4.9
0.0049
E15 cortex
TCTGAAAAAA (
10
)
4.9
0.0049
P1 cortex
CACCACCACA (
14
)
27.3
0.0273
P1 cortex
GTTTCAAGAG
(
4
)
22.7
0.0227
P1 cortex
CCCTTCCCTT (
9
)
18.2
0.0182
P1 cortex
GTAGGATAGC
(
2
)
13.6
0.0136
P1 cortex
TAAAATAAAA (
14
)
13.6
0.0136
P1 cortex
ACCAGCAGCC
(
5
)
4.5
0.0045
P1 cortex
CCAATCTGTG (
4
)
4.5
0.0045
P1 cortex
GCGTTGGTCT (
3
)
4.5
0.0045
Hypothalamus
CACCACCACA (
14
)
18.1
0.0181
Hypothalamus
GCGTTGGTCT (
3
)
16.3
0.0163
Hypothalamus
GTAGGATAGC
(
2
)
14.5
0.0145
Hypothalamus
TAAAATAAAA (
14
)
12.7
0.0127
Hypothalamus
CCCTTCCCTT (
9
)
5.4
0.0054
Hypothalamus
TCTGAAAAAA (
10
)
5.4
0.0054
Hypothalamus
CCAATCTGTG (
4
)
3.6
0.0036
Hypothalamus
GTAAAAAAAG
(
6
)
1.8
0.0018
E12.5 retina
CACCACCACA (
14
)
41.3
0.0413
E12.5 retina
CCCTTCCCTT (
9
)
16.9
0.0169
E12.5 retina
TAAAATAAAA (
14
)
11.3
0.0113
E12.5 retina
CCAATCTGTG (
4
)
5.6
0.0056
E12.5 retina
GCGTTGGTCT (
3
)
5.6
0.0056
E12.5 retina
TCTGAAAAAA (
10
)
5.6
0.0056
E12.5 retina
CAAACTCCCC
(
2
)
3.8
0.0038
E12.5 retina
GTAAAAAAAG
(
6
)
3.8
0.0038
E12.5 retina
GTAGGATAGC
(
2
)
3.8
0.0038
E12.5 retina
CCTTTCAGTC (
7
)
1.9
0.0019
E12.5 retina
GGGAAACAGT
(
3
)
1.9
0.0019
E14.5 retina
CCCTTCCCTT (
9
)
10.9
0.0109
E14.5 retina
CACCACCACA (
14
)
9.1
0.0091
E14.5 retina
GTAGGATAGC
(
2
)
7.3
0.0073
E14.5 retina
GATGCTTTGG (
6
)
3.6
0.0036
E14.5 retina
TAAAATAAAA (
14
)
3.6
0.0036
E14.5 retina
TCTGAAAAAA (
10
)
3.6
0.0036
E14.5 retina
CACACCACAC (
9
)
1.8
0.0018
E14.5 retina
CCAATCTGTG (
4
)
1.8
0.0018
E14.5 retina
CCTTTCAGTC (
7
)
1.8
0.0018
E16.5 retina
CCCTTCCCTT (
9
)
41.7
0.0417
E16.5 retina
CACCACCACA (
14
)
18.1
0.0181
E16.5 retina
GTAGGATAGC
(
2
)
10.9
0.0109
E16.5 retina
TAAAATAAAA (
14
)
5.4
0.0054
E16.5 retina
TCTGAAAAAA (
10
)
5.4
0.0054
E16.5 retina
CCAATCTGTG (
4
)
3.6
0.0036
E16.5 retina
GCGTTGGTCT (
3
)
1.8
0.0018
E18.5 retina
CACCACCACA (
14
)
23.6
0.0236
E18.5 retina
TAAAATAAAA (
14
)
14.6
0.0146
E18.5 retina
CCCTTCCCTT (
9
)
9.1
0.0091
E18.5 retina
TCTGAAAAAA (
10
)
9.1
0.0091
E18.5 retina
GTAGGATAGC
(
2
)
7.3
0.0073
E18.5 retina
CCAATCTGTG (
4
)
1.8
0.0018
E18.5 retina
GATGCTTTGG (
6
)
1.8
0.0018
P0.5 retina
CACCACCACA (
14
)
41.2
0.0412
P0.5 retina
CCCTTCCCTT (
9
)
37.3
0.0373
P0.5 retina
GTTTCAAGAG
(
4
)
9.8
0.0098
P0.5 retina
CCAATCTGTG (
4
)
7.9
0.0079
P0.5 retina
GATGCTTTGG (
6
)
3.9
0.0039
P0.5 retina
ACCAGCAGCC
(
5
)
2
0.002
P0.5 retina
TAAAATAAAA (
14
)
2
0.002
P2.5 retina
CACCACCACA (
14
)
24.6
0.0246
P2.5 retina
CCCTTCCCTT (
9
)
17.6
0.0176
P2.5 retina
TAAAATAAAA (
14
)
8.8
0.0088
P2.5 retina
CCAATCTGTG (
4
)
5.3
0.0053
P2.5 retina
GCGTTGGTCT (
3
)
5.3
0.0053
P2.5 retina
GTAGGATAGC
(
2
)
3.5
0.0035
P2.5 retina
TCTGAAAAAA (
10
)
3.5
0.0035
P2.5 retina
CACACCACAC (
9
)
1.8
0.0018
P2.5 retina
GATGCTTTGG (
6
)
1.8
0.0018
P4.5 retina
TAAAATAAAA (
14
)
27.7
0.0277
P4.5 retina
CACCACCACA (
14
)
25.8
0.0258
P4.5 retina
GTAGGATAGC
(
2
)
13.9
0.0139
P4.5 retina
CCCTTCCCTT (
9
)
5.9
0.0059
P4.5 retina
GCGTTGGTCT (
3
)
5.9
0.0059
P4.5 retina
CCAATCTGTG (
4
)
2
0.002
P6.5 retina
CACCACCACA (
14
)
28.3
0.0283
P6.5 retina
CCCTTCCCTT (
9
)
15
0.015
P6.5 retina
GCGTTGGTCT (
3
)
11.7
0.0117
P6.5 retina
GTAGGATAGC
(
2
)
11.7
0.0117
P6.5 retina
TAAAATAAAA (
14
)
11.7
0.0117
P6.5 retina
GATGCTTTGG (
6
)
8.3
0.0083
P6.5 retina
CCAATCTGTG (
4
)
5
0.005
P6.5 retina
CACACCACAC (
9
)
1.7
0.0017
P10.5 crx- retina
GTAGGATAGC
(
2
)
37.2
0.0372
P10.5 crx- retina
CACCACCACA (
14
)
13
0.013
P10.5 crx- retina
GATGCTTTGG (
6
)
5.6
0.0056
P10.5 crx- retina
TAAAATAAAA (
14
)
5.6
0.0056
P10.5 crx- retina
TCTGAAAAAA (
10
)
5.6
0.0056
P10.5 crx- retina
CCCTTCCCTT (
9
)
3.7
0.0037
P10.5 crx- retina
GTTTCAAGAG
(
4
)
3.7
0.0037
P10.5 crx- retina
CCAATCTGTG (
4
)
1.9
0.0019
P10.5 crx- retina
GCAGAGACAG (
5
)
1.9
0.0019
P10.5 crx- retina
GCGTTGGTCT (
3
)
1.9
0.0019
P10.5 crx+ retina
GCGTTGGTCT (
3
)
19.2
0.0192
P10.5 crx+ retina
CACCACCACA (
14
)
17.3
0.0173
P10.5 crx+ retina
GTAGGATAGC
(
2
)
5.8
0.0058
P10.5 crx+ retina
CCCTTCCCTT (
9
)
3.8
0.0038
P10.5 crx+ retina
CCAATCTGTG (
4
)
1.9
0.0019
P10.5 crx+ retina
CCTTTCAGTC (
7
)
1.9
0.0019
P10.5 crx+ retina
GATGCTTTGG (
6
)
1.9
0.0019
P10.5 crx+ retina
GCAGAGACAG (
5
)
1.9
0.0019
P10.5 crx+ retina
GTTTCAAGAG
(
4
)
1.9
0.0019
P10.5 crx+ retina
TAAAATAAAA (
14
)
1.9
0.0019
P10.5 crx+ retina
TCTGAAAAAA (
10
)
1.9
0.0019
Adult retinal
CACCACCACA (
14
)
13
0.013
Adult retinal
GTAGGATAGC
(
2
)
9.3
0.0093
Adult retinal
GCGTTGGTCT (
3
)
7.4
0.0074
Adult retinal
CCCTTCCCTT (
9
)
5.6
0.0056
Adult retinal
GTTTCAAGAG
(
4
)
3.7
0.0037
Adult retinal
CAAACTCCCC
(
2
)
1.9
0.0019
Adult retinal
CCAATCTGTG (
4
)
1.9
0.0019
Adult retinal
GATGCTTTGG (
6
)
1.9
0.0019
Adult retinal
GCAGAGACAG (
5
)
1.9
0.0019
Adult retinal
TCTGAAAAAA (
10
)
1.9
0.0019
ONL
CACCACCACA (
14
)
23
0.023
ONL
GCGTTGGTCT (
3
)
15.3
0.0153
ONL
GTAGGATAGC
(
2
)
15.3
0.0153
ONL
TAAAATAAAA (
14
)
7.7
0.0077
ONL
GATGCTTTGG (
6
)
3.8
0.0038
ONL
CCAATCTGTG (
4
)
1.9
0.0019
ONL
GTTTCAAGAG
(
4
)
1.9
0.0019
