Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.132857	Tm9sf1	transmembrane 9 superfamily member 1	14		74140
Gene Ontology	extracellular space | integral to membrane | transport | transporter activity
Human Homolog	TM9SF1[transmembrane 9 superfamily member 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 74 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGGTTGCTGG (369) 68.5 0.0685 P8 Cb GC GTGGCGCACG (61) 13.1 0.0131 P8 Cb GC CCCCATTGAT 1.6 0.0016 Cb medulloblastoma TGGTTGCTGG (369) 113.3 0.1133 Cb medulloblastoma GTGGCGCACG (61) 6.9 0.0069 P8 GC+1d culture TGGTTGCTGG (369) 57.1 0.0571 P8 GC+1d culture GTGGCGCACG (61) 6.8 0.0068 P8 GC+1d culture GCGCTTGTGT (4) 2.3 0.0023 P8 GC+1d culture ATGAAAGCAG 1.1 0.0011 P8 GC+1d culture CCCTATTTTT (3) 1.1 0.0011 P8 GC+SHH+1d culture TGGTTGCTGG (369) 89 0.089 P8 GC+SHH+1d culture GCGCTTGTGT (4) 2.3 0.0023 P8 GC+SHH+1d culture GTGGCGCACG (61) 2.3 0.0023 P8 GC+SHH+1d culture CTGGGTACCA 1.2 0.0012 3T3 fibroblasts TGGTTGCTGG (369) 220.8 0.2208 3T3 fibroblasts GTGGCGCACG (61) 63.1 0.0631 3T3 fibroblasts ATGAAAGCAG 10.5 0.0105 E15 cortex TGGTTGCTGG (369) 277.1 0.2771 E15 cortex GTGGCGCACG (61) 113.8 0.1138 P1 cortex TGGTTGCTGG (369) 86.4 0.0864 P1 cortex GTGGCGCACG (61) 18.2 0.0182 P1 cortex CCCTATTTTT (3) 4.5 0.0045 P1 cortex CGGGTGCTGG (2) 4.5 0.0045 Hypothalamus TGGTTGCTGG (369) 349.6 0.3496 Hypothalamus GTGGCGCACG (61) 3.6 0.0036 Hypothalamus CCCCATTGAT 1.8 0.0018 E12.5 retina TGGTTGCTGG (369) 157.7 0.1577 E12.5 retina GTGGCGCACG (61) 11.3 0.0113 E12.5 retina CTGGGTACCA 1.9 0.0019 E14.5 retina TGGTTGCTGG (369) 936.5 0.9365 E14.5 retina GTGGCGCACG (61) 29.2 0.0292 E14.5 retina ATGAAAGCAG 3.6 0.0036 E14.5 retina CGGGTGCTGG (2) 1.8 0.0018 E14.5 retina GCGCTTGTGT (4) 1.8 0.0018 E16.5 retina TGGTTGCTGG (369) 767.9 0.7679 E16.5 retina GTGGCGCACG (61) 25.4 0.0254 E16.5 retina CCCCATTGAT 3.6 0.0036 E16.5 retina CTGGGTACCA 1.8 0.0018 E18.5 retina TGGTTGCTGG (369) 252.8 0.2528 E18.5 retina GTGGCGCACG (61) 10.9 0.0109 E18.5 retina CGGGTGCTGG (2) 1.8 0.0018 E18.5 retina CTGGGTACCA 1.8 0.0018 P0.5 retina TGGTTGCTGG (369) 190.4 0.1904 P0.5 retina GTGGCGCACG (61) 25.5 0.0255 P0.5 retina CCCCATTGAT 2 0.002 P2.5 retina TGGTTGCTGG (369) 165.4 0.1654 P2.5 retina GTGGCGCACG (61) 17.6 0.0176 P2.5 retina CCCCATTGAT 5.3 0.0053 P2.5 retina ATGAAAGCAG 1.8 0.0018 P2.5 retina GCGCTTGTGT (4) 1.8 0.0018 P4.5 retina TGGTTGCTGG (369) 150.6 0.1506 P4.5 retina GTGGCGCACG (61) 17.8 0.0178 P4.5 retina ATGAAAGCAG 2 0.002 P4.5 retina CCCCATTGAT 2 0.002 P4.5 retina CCCTATTTTT (3) 2 0.002 P4.5 retina GCGCTTGTGT (4) 2 0.002 P6.5 retina TGGTTGCTGG (369) 156.7 0.1567 P6.5 retina GTGGCGCACG (61) 38.3 0.0383 P6.5 retina CCCCATTGAT 3.3 0.0033 P6.5 retina GCGCTTGTGT (4) 3.3 0.0033 P6.5 retina ATGAAAGCAG 1.7 0.0017 P10.5 crx- retina TGGTTGCTGG (369) 280.5 0.2805 P10.5 crx- retina GTGGCGCACG (61) 13 0.013 P10.5 crx- retina CCCCATTGAT 9.3 0.0093 P10.5 crx- retina CCCTATTTTT (3) 1.9 0.0019 P10.5 crx+ retina TGGTTGCTGG (369) 101.9 0.1019 P10.5 crx+ retina GTGGCGCACG (61) 32.7 0.0327 Adult retinal TGGTTGCTGG (369) 214.8 0.2148 Adult retinal GTGGCGCACG (61) 22.2 0.0222 ONL TGGTTGCTGG (369) 398.4 0.3984 ONL GTGGCGCACG (61) 23 0.023 ONL CGGGTGCTGG (2) 5.7 0.0057 ONL CCCCATTGAT 1.9 0.0019 ONL GCGCTTGTGT (4) 1.9 0.0019