Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.134191	A930015P12Rik	RIKEN cDNA A930015P12 gene	13		320248
Mm.134191	Sfxn1	sideroflexin 1	13	13 35.0 cM	14057
Gene Ontology	cation transport | cation transporter activity | erythrocyte differentiation | integral to membrane | iron ion transport | iron ion transport | membrane | mitochondrion | transport
Human Homolog	SFXN1[sideroflexin 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 86 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGCAGTCCCC (3) 6.5 0.0065 P8 Cb GC AGCTGCTGCT (3) 3.3 0.0033 P8 Cb GC AACACCTTGG (3) 1.6 0.0016 P8 Cb GC ATTTAAAAAA (10) 1.6 0.0016 P8 Cb GC ATTTATTAAA (8) 1.6 0.0016 P8 Cb GC GAGCTGGGCT (4) 1.6 0.0016 Cb medulloblastoma GGCAGTCCCC (3) 4.6 0.0046 Cb medulloblastoma ATTTAAAAAA (10) 2.3 0.0023 Cb medulloblastoma GACTGGGGCC (2) 2.3 0.0023 Cb medulloblastoma TCTGTTGACA (2) 2.3 0.0023 Cb medulloblastoma TGGTTTCTTT (3) 2.3 0.0023 P8 GC+1d culture TCTGTGACAA (3) 3.4 0.0034 P8 GC+1d culture AACACCTTGG (3) 2.3 0.0023 P8 GC+1d culture ATTTATTAAA (8) 2.3 0.0023 P8 GC+1d culture AGCTGCTGCT (3) 1.1 0.0011 P8 GC+1d culture ATTTAAAAAA (10) 1.1 0.0011 P8 GC+1d culture GACTGGGGCC (2) 1.1 0.0011 P8 GC+1d culture TGGTTTCTTT (3) 1.1 0.0011 P8 GC+SHH+1d culture TCTGTTGACA (2) 3.5 0.0035 P8 GC+SHH+1d culture AGCTGCTGCT (3) 2.3 0.0023 P8 GC+SHH+1d culture ATTTAAAAAA (10) 1.2 0.0012 P8 GC+SHH+1d culture ATTTATTAAA (8) 1.2 0.0012 P8 GC+SHH+1d culture GGCAGTCCCC (3) 1.2 0.0012 P8 GC+SHH+1d culture TCTGTGACAA (3) 1.2 0.0012 3T3 fibroblasts AGCTGCTGCT (3) 3.5 0.0035 3T3 fibroblasts GAGCTGGGCT (4) 3.5 0.0035 3T3 fibroblasts TCTGTGACAA (3) 3.5 0.0035 E15 cortex GGCAGTCCCC (3) 14.8 0.0148 E15 cortex GACTGGGGCC (2) 4.9 0.0049 E15 cortex GAGCTGGGCT (4) 4.9 0.0049 P1 cortex TCTGTGACAA (3) 22.7 0.0227 P1 cortex ATTTAAAAAA (10) 9.1 0.0091 P1 cortex ATTTATTAAA (8) 4.5 0.0045 P1 cortex TGGTTTCTTT (3) 4.5 0.0045 Hypothalamus GAGCTGGGCT (4) 5.4 0.0054 Hypothalamus ATTTATTAAA (8) 3.6 0.0036 Hypothalamus TCTGTGACAA (3) 3.6 0.0036 Hypothalamus ATTTAAAAAA (10) 1.8 0.0018 E12.5 retina GGCAGTCCCC (3) 3.8 0.0038 E12.5 retina AGCTGCTGCT (3) 1.9 0.0019 E12.5 retina ATTTAAAAAA (10) 1.9 0.0019 E12.5 retina TGGTTTCTTT (3) 1.9 0.0019 E14.5 retina ATTTAAAAAA (10) 3.6 0.0036 E14.5 retina TCTGTGACAA (3) 3.6 0.0036 E14.5 retina GAACTCTTCT (3) 1.8 0.0018 E14.5 retina GGCAGTCCCC (3) 1.8 0.0018 E16.5 retina TCTGTGACAA (3) 3.6 0.0036 E16.5 retina AACACCTTGG (3) 1.8 0.0018 E16.5 retina AGCTGCTGCT (3) 1.8 0.0018 E16.5 retina ATTTATTAAA (8) 1.8 0.0018 E16.5 retina GAGCTGGGCT (4) 1.8 0.0018 E16.5 retina TCTGTTGACA (2) 1.8 0.0018 E18.5 retina AGCTGCTGCT (3) 3.6 0.0036 E18.5 retina ATTTATTAAA (8) 3.6 0.0036 E18.5 retina ATTTAAAAAA (10) 1.8 0.0018 P0.5 retina GGCAGTCCCC (3) 5.9 0.0059 P0.5 retina TCTGTGACAA (3) 3.9 0.0039 P0.5 retina TCTGTTGACA (2) 3.9 0.0039 P0.5 retina AGCTGCTGCT (3) 2 0.002 P0.5 retina GAGCTGGGCT (4) 2 0.002 P0.5 retina TGGTTTCTTT (3) 2 0.002 P2.5 retina TCTGTGACAA (3) 5.3 0.0053 P2.5 retina AGCTGCTGCT (3) 3.5 0.0035 P2.5 retina GAGCTGGGCT (4) 3.5 0.0035 P2.5 retina GGCAGTCCCC (3) 1.8 0.0018 P4.5 retina ATTTAAAAAA (10) 4 0.004 P4.5 retina TCTGTTGACA (2) 2 0.002 P6.5 retina ATTTAAAAAA (10) 1.7 0.0017 P6.5 retina ATTTATTAAA (8) 1.7 0.0017 P6.5 retina GGCAGTCCCC (3) 1.7 0.0017 P6.5 retina TCTGTTGACA (2) 1.7 0.0017 P10.5 crx- retina GAACTCTTCT (3) 1.9 0.0019 P10.5 crx- retina GACTGGGGCC (2) 1.9 0.0019 P10.5 crx+ retina ATTTAAAAAA (10) 1.9 0.0019 P10.5 crx+ retina GAACTCTTCT (3) 1.9 0.0019 P10.5 crx+ retina GAGCTGGGCT (4) 1.9 0.0019 Adult retinal GGCAGTCCCC (3) 5.6 0.0056 Adult retinal TCTGTGACAA (3) 1.9 0.0019 Adult retinal TCTGTTGACA (2) 1.9 0.0019 ONL AACACCTTGG (3) 1.9 0.0019 ONL AGCTGCTGCT (3) 1.9 0.0019 ONL ATTTAAAAAA (10) 1.9 0.0019 ONL ATTTATTAAA (8) 1.9 0.0019 ONL GGCAGTCCCC (3) 1.9 0.0019 ONL TCTGTTGACA (2) 1.9 0.0019 ONL TGGTTTCTTT (3) 1.9 0.0019