Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.136093	D830035I06	hypothetical protein D830035I06	5		330154
Mm.136093	Atp5k	ATP synthase, H+ transporting, mitochondrial F1F0 complex, subunit e	5	5 56.0 cM	11958
Gene Ontology	ATP biosynthesis | ATP synthesis coupled proton transport | hydrogen ion transporter activity | hydrogen-exporting ATPase activity, phosphorylative mechanism | hydrogen-transporting ATP synthase activity, rotational mechanism | hydrogen-transporting ATPase activity, rotational mechanism | mitochondrion | proton transport | proton-transporting ATP synthase complex (sensu Eukarya) | proton-transporting two-sector ATPase complex
Human Homolog	ATP5I[ATP synthase, H+ transporting, mitochondrial F0 complex, subunit e]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 62 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCCCAGGCTC (3) 39.2 0.0392 P8 Cb GC GCATACGGCG (2) 26.1 0.0261 P8 Cb GC CCGATGATCA (2) 1.6 0.0016 Cb medulloblastoma GCATACGGCG (2) 37 0.037 Cb medulloblastoma GCCCAGGCTC (3) 13.9 0.0139 Cb medulloblastoma CCGATGATCA (2) 6.9 0.0069 P8 GC+1d culture GCCCAGGCTC (3) 25.1 0.0251 P8 GC+1d culture GCATACGGCG (2) 21.7 0.0217 P8 GC+SHH+1d culture GCCCAGGCTC (3) 26.9 0.0269 P8 GC+SHH+1d culture GCATACGGCG (2) 25.8 0.0258 P8 GC+SHH+1d culture CCGATGATCA (2) 3.5 0.0035 P8 GC+SHH+1d culture TCCACAACAC (4) 2.3 0.0023 3T3 fibroblasts GCCCAGGCTC (3) 49.1 0.0491 3T3 fibroblasts GCATACGGCG (2) 28 0.028 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 3T3 fibroblasts TCCACAACAC (4) 3.5 0.0035 E15 cortex GCATACGGCG (2) 74.2 0.0742 E15 cortex GCCCAGGCTC (3) 39.6 0.0396 E15 cortex GTCATAGCTG (590) 4.9 0.0049 P1 cortex GCATACGGCG (2) 13.6 0.0136 Hypothalamus GCATACGGCG (2) 16.3 0.0163 Hypothalamus GCCCAGGCTC (3) 9.1 0.0091 Hypothalamus CCGATGATCA (2) 3.6 0.0036 E12.5 retina GCCCAGGCTC (3) 18.8 0.0188 E12.5 retina GCATACGGCG (2) 11.3 0.0113 E14.5 retina GCCCAGGCTC (3) 14.6 0.0146 E14.5 retina GCATACGGCG (2) 9.1 0.0091 E16.5 retina GCCCAGGCTC (3) 21.7 0.0217 E16.5 retina GCATACGGCG (2) 10.9 0.0109 E16.5 retina CCGATGATCA (2) 1.8 0.0018 E18.5 retina GCCCAGGCTC (3) 20 0.02 E18.5 retina GCATACGGCG (2) 5.5 0.0055 E18.5 retina CCGATGATCA (2) 3.6 0.0036 P0.5 retina GCCCAGGCTC (3) 29.4 0.0294 P0.5 retina GCATACGGCG (2) 15.7 0.0157 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P0.5 retina CCGATGATCA (2) 2 0.002 P2.5 retina GCCCAGGCTC (3) 19.4 0.0194 P2.5 retina GCATACGGCG (2) 15.8 0.0158 P2.5 retina CCGATGATCA (2) 3.5 0.0035 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P4.5 retina GCCCAGGCTC (3) 13.9 0.0139 P4.5 retina GCATACGGCG (2) 9.9 0.0099 P4.5 retina CCGATGATCA (2) 2 0.002 P4.5 retina GTCATAGCTG (590) 2 0.002 P6.5 retina GCCCAGGCTC (3) 15 0.015 P6.5 retina GCATACGGCG (2) 5 0.005 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P6.5 retina CCGATGATCA (2) 1.7 0.0017 P10.5 crx- retina GCCCAGGCTC (3) 55.7 0.0557 P10.5 crx- retina GCATACGGCG (2) 50.2 0.0502 P10.5 crx+ retina GCATACGGCG (2) 34.6 0.0346 P10.5 crx+ retina GCCCAGGCTC (3) 25 0.025 P10.5 crx+ retina CCGATGATCA (2) 5.8 0.0058 Adult retinal GCATACGGCG (2) 31.5 0.0315 Adult retinal GCCCAGGCTC (3) 5.6 0.0056 Adult retinal CCGATGATCA (2) 3.7 0.0037 Adult retinal GTCATAGCTG (590) 1.9 0.0019 ONL GCATACGGCG (2) 11.5 0.0115 ONL GCCCAGGCTC (3) 9.6 0.0096 ONL GTCATAGCTG (590) 5.7 0.0057 ONL CCGATGATCA (2) 1.9 0.0019