Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.136418	D11Ertd726e	DNA segment, Chr 11, ERATO Doi 726, expressed	11	11 63.0 cM	52682
Mm.136418	AA415038	expressed sequence AA415038	11		103570
Mm.136418	9430041J06Rik	RIKEN cDNA 9430041J06 gene	11		319779
Mm.136418	D030002E05Rik	RIKEN cDNA D030002E05 gene	11		319780
Mm.136418	1700081L11Rik	RIKEN cDNA 1700081L11 gene	11		76719
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 78 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATTCTGTTTG (5) 8.2 0.0082 P8 Cb GC TGGGTGCTGG (64) 8.2 0.0082 P8 Cb GC ATTCCCATTT (7) 3.3 0.0033 P8 Cb GC TATGTGAGTA (10) 1.6 0.0016 P8 Cb GC TTCGCTGCCA (8) 1.6 0.0016 Cb medulloblastoma ATTCTGTTTG (5) 11.6 0.0116 Cb medulloblastoma TGGGTGCTGG (64) 9.2 0.0092 Cb medulloblastoma ATTCCCATTT (7) 2.3 0.0023 Cb medulloblastoma TTCGCTGCCA (8) 2.3 0.0023 P8 GC+1d culture TGGGTGCTGG (64) 5.7 0.0057 P8 GC+1d culture TCGTGTCTCC (6) 3.4 0.0034 P8 GC+1d culture ATTCTGTTTG (5) 2.3 0.0023 P8 GC+1d culture ACAATTCCAG (8) 1.1 0.0011 P8 GC+1d culture ATTCCCATTT (7) 1.1 0.0011 P8 GC+1d culture TTCGCTGCCA (8) 1.1 0.0011 P8 GC+SHH+1d culture ATTCTGTTTG (5) 8.2 0.0082 P8 GC+SHH+1d culture TGGGTGCTGG (64) 3.5 0.0035 P8 GC+SHH+1d culture TTCGCTGCCA (8) 3.5 0.0035 P8 GC+SHH+1d culture TAGCTGTCTT (5) 1.2 0.0012 P8 GC+SHH+1d culture TATGTGAGTA (10) 1.2 0.0012 3T3 fibroblasts TGGGTGCTGG (64) 17.5 0.0175 3T3 fibroblasts ATTCCCATTT (7) 3.5 0.0035 E15 cortex ATTCTGTTTG (5) 14.8 0.0148 E15 cortex TGGGTGCTGG (64) 14.8 0.0148 E15 cortex ACAATTCCAG (8) 4.9 0.0049 E15 cortex TAGCTGTCTT (5) 4.9 0.0049 P1 cortex TGGGTGCTGG (64) 13.6 0.0136 P1 cortex ATTCTGTTTG (5) 4.5 0.0045 Hypothalamus TGGGTGCTGG (64) 9.1 0.0091 Hypothalamus TTCGCTGCCA (8) 5.4 0.0054 Hypothalamus ACAATTCCAG (8) 1.8 0.0018 Hypothalamus GGAGAGATAA (5) 1.8 0.0018 E12.5 retina ATTCTGTTTG (5) 9.4 0.0094 E12.5 retina TGGGTGCTGG (64) 9.4 0.0094 E12.5 retina TTCGCTGCCA (8) 3.8 0.0038 E12.5 retina GGAGAGATAA (5) 1.9 0.0019 E14.5 retina TGGGTGCTGG (64) 54.7 0.0547 E14.5 retina ATTCTGTTTG (5) 10.9 0.0109 E14.5 retina TATGTGAGTA (10) 3.6 0.0036 E14.5 retina ATTCCCATTT (7) 1.8 0.0018 E14.5 retina TAGCTGTCTT (5) 1.8 0.0018 E14.5 retina TTCGCTGCCA (8) 1.8 0.0018 E16.5 retina TGGGTGCTGG (64) 41.7 0.0417 E16.5 retina ATTCTGTTTG (5) 12.7 0.0127 E16.5 retina TTCGCTGCCA (8) 3.6 0.0036 E16.5 retina TATGTGAGTA (10) 1.8 0.0018 E18.5 retina TGGGTGCTGG (64) 20 0.02 E18.5 retina ATTCTGTTTG (5) 9.1 0.0091 P0.5 retina ATTCTGTTTG (5) 11.8 0.0118 P0.5 retina TGGGTGCTGG (64) 11.8 0.0118 P0.5 retina TTCGCTGCCA (8) 3.9 0.0039 P2.5 retina TGGGTGCTGG (64) 17.6 0.0176 P2.5 retina ATTCTGTTTG (5) 7 0.007 P2.5 retina TTCGCTGCCA (8) 5.3 0.0053 P2.5 retina GGAGAGATAA (5) 3.5 0.0035 P2.5 retina TATGTGAGTA (10) 1.8 0.0018 P2.5 retina TCGTGTCTCC (6) 1.8 0.0018 P4.5 retina ATTCTGTTTG (5) 13.9 0.0139 P4.5 retina TGGGTGCTGG (64) 9.9 0.0099 P4.5 retina TTCGCTGCCA (8) 5.9 0.0059 P6.5 retina TGGGTGCTGG (64) 13.3 0.0133 P6.5 retina TTCGCTGCCA (8) 8.3 0.0083 P6.5 retina ATTCTGTTTG (5) 5 0.005 P6.5 retina TATGTGAGTA (10) 3.3 0.0033 P6.5 retina GGAGAGATAA (5) 1.7 0.0017 P10.5 crx- retina TGGGTGCTGG (64) 20.4 0.0204 P10.5 crx- retina ATTCTGTTTG (5) 16.7 0.0167 P10.5 crx- retina TTCGCTGCCA (8) 5.6 0.0056 P10.5 crx+ retina TGGGTGCTGG (64) 15.4 0.0154 P10.5 crx+ retina ATTCTGTTTG (5) 3.8 0.0038 P10.5 crx+ retina TTCGCTGCCA (8) 1.9 0.0019 Adult retinal TGGGTGCTGG (64) 13 0.013 Adult retinal ATTCTGTTTG (5) 5.6 0.0056 Adult retinal TATGTGAGTA (10) 3.7 0.0037 ONL TGGGTGCTGG (64) 40.2 0.0402 ONL ATTCTGTTTG (5) 11.5 0.0115 ONL TATGTGAGTA (10) 3.8 0.0038 ONL ATTCCCATTT (7) 1.9 0.0019