Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.138346	Zic5	zinc finger protein of the cerebellum 5	14		65100
Gene Ontology	cell differentiation | cellular_component unknown | molecular_function unknown
Human Homolog	ZIC5[Zic family member 5 (odd-paired homolog, Drosophila)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 45 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AATAGGTTAA 3.3 0.0033 P8 Cb GC CACGAGCTGG (3) 3.3 0.0033 P8 Cb GC TCCCAGAGTG (3) 3.3 0.0033 P8 Cb GC CACAAGGCCC (6) 1.6 0.0016 Cb medulloblastoma AATAGGTTAA 4.6 0.0046 Cb medulloblastoma GGGGAGGGGG (10) 4.6 0.0046 Cb medulloblastoma CACAAGGCCC (6) 2.3 0.0023 P8 GC+1d culture AATAGGTTAA 14.8 0.0148 P8 GC+1d culture CACGAGCTGG (3) 2.3 0.0023 P8 GC+1d culture CACTGTACTA 2.3 0.0023 P8 GC+1d culture ATTTGTAGAA (3) 1.1 0.0011 P8 GC+1d culture CACAAGGCCC (6) 1.1 0.0011 P8 GC+1d culture TCCCAGAGTG (3) 1.1 0.0011 P8 GC+SHH+1d culture AATAGGTTAA 5.9 0.0059 P8 GC+SHH+1d culture CACGAGCTGG (3) 4.7 0.0047 P8 GC+SHH+1d culture ATAAAGAAAA (11) 1.2 0.0012 P8 GC+SHH+1d culture ATTTGTAGAA (3) 1.2 0.0012 P8 GC+SHH+1d culture CACAAGGCCC (6) 1.2 0.0012 P8 GC+SHH+1d culture CACTGTACTA 1.2 0.0012 P8 GC+SHH+1d culture GGGGAGGGGG (10) 1.2 0.0012 P8 GC+SHH+1d culture TCATTATAAA 1.2 0.0012 Hypothalamus GGGGAGGGGG (10) 5.4 0.0054 Hypothalamus CACAAGGCCC (6) 1.8 0.0018 E12.5 retina GGGGAGGGGG (10) 7.5 0.0075 E12.5 retina TCATTATAAA 3.8 0.0038 E12.5 retina AATAGGTTAA 1.9 0.0019 E12.5 retina CACAAGGCCC (6) 1.9 0.0019 E14.5 retina ATAAAGAAAA (11) 1.8 0.0018 E14.5 retina ATTTGTAGAA (3) 1.8 0.0018 E14.5 retina CACAAGGCCC (6) 1.8 0.0018 E16.5 retina AATAGGTTAA 1.8 0.0018 E16.5 retina ATTTGTAGAA (3) 1.8 0.0018 E18.5 retina CACAAGGCCC (6) 1.8 0.0018 P2.5 retina ATAAAGAAAA (11) 3.5 0.0035 P2.5 retina GGGGAGGGGG (10) 1.8 0.0018 P4.5 retina AATAGGTTAA 2 0.002 P6.5 retina CACAAGGCCC (6) 1.7 0.0017 P6.5 retina CACGAGCTGG (3) 1.7 0.0017 P10.5 crx- retina CACTGTACTA 1.9 0.0019 P10.5 crx+ retina GGGGAGGGGG (10) 3.8 0.0038 P10.5 crx+ retina CACAAGGCCC (6) 1.9 0.0019 Adult retinal GGGGAGGGGG (10) 3.7 0.0037 Adult retinal ATAAAGAAAA (11) 1.9 0.0019 ONL CACAAGGCCC (6) 3.8 0.0038 ONL GGGGAGGGGG (10) 1.9 0.0019