Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.13886	Sui1-rs1	suppressor of initiator codon mutations, related sequence 1 (S. cerevisiae)	11	8 37.0 cM	20918
Gene Ontology	protein biosynthesis | translation initiation factor activity | translational initiation
Human Homolog	SUI1[putative translation initiation factor]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 181 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (658) 203.9 0.2039 P8 Cb GC CAATAAACTG (8) 79.9 0.0799 P8 Cb GC CAAAAAAAAA (157) 47.3 0.0473 P8 Cb GC TGAAGGAACA (3) 34.3 0.0343 P8 Cb GC AACCTTCAGC (3) 1.6 0.0016 P8 Cb GC GGTTTTAAGT (2) 1.6 0.0016 P8 Cb GC TGAAAGAACA (6) 1.6 0.0016 Cb medulloblastoma AAAAAAAAAA (658) 797.8 0.7978 Cb medulloblastoma CAATAAACTG (8) 99.4 0.0994 Cb medulloblastoma CAAAAAAAAA (157) 92.5 0.0925 Cb medulloblastoma TGAAGGAACA (3) 30.1 0.0301 Cb medulloblastoma AAGGAGTTAC (5) 9.2 0.0092 Cb medulloblastoma CGATAAACTG 4.6 0.0046 Cb medulloblastoma GGTTTTAAGT (2) 4.6 0.0046 Cb medulloblastoma CAATTAACTG (4) 2.3 0.0023 Cb medulloblastoma CTGTGTAGTC (4) 2.3 0.0023 Cb medulloblastoma GCCCTGGGGA (7) 2.3 0.0023 Cb medulloblastoma TCGCAACACC 2.3 0.0023 Cb medulloblastoma TGAAAGAACA (6) 2.3 0.0023 P8 GC+1d culture AAAAAAAAAA (658) 204.3 0.2043 P8 GC+1d culture CAATAAACTG (8) 93.6 0.0936 P8 GC+1d culture CAAAAAAAAA (157) 37.7 0.0377 P8 GC+1d culture TGAAGGAACA (3) 37.7 0.0377 P8 GC+1d culture AAGGAGTTAC (5) 3.4 0.0034 P8 GC+1d culture GGTTTTAAGT (2) 3.4 0.0034 P8 GC+1d culture AACCTTCAGC (3) 2.3 0.0023 P8 GC+1d culture GGTTTTAACT (6) 2.3 0.0023 P8 GC+1d culture CAATAAAAAG (6) 1.1 0.0011 P8 GC+1d culture CAATTAACTG (4) 1.1 0.0011 P8 GC+1d culture GCCCTGGGGA (7) 1.1 0.0011 P8 GC+SHH+1d culture AAAAAAAAAA (658) 278.7 0.2787 P8 GC+SHH+1d culture CAATAAACTG (8) 117.1 0.1171 P8 GC+SHH+1d culture CAAAAAAAAA (157) 58.5 0.0585 P8 GC+SHH+1d culture TGAAGGAACA (3) 26.9 0.0269 P8 GC+SHH+1d culture AAGGAGTTAC (5) 4.7 0.0047 P8 GC+SHH+1d culture GGTTTTAACT (6) 3.5 0.0035 P8 GC+SHH+1d culture AACCTTCAGC (3) 2.3 0.0023 P8 GC+SHH+1d culture CGATAAACTG 2.3 0.0023 P8 GC+SHH+1d culture GGTTTTAAGT (2) 2.3 0.0023 P8 GC+SHH+1d culture CAATAAAAAG (6) 1.2 0.0012 3T3 fibroblasts AAAAAAAAAA (658) 28 0.028 3T3 fibroblasts CAATAAACTG (8) 17.5 0.0175 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 3T3 fibroblasts GCCGGGCGTG (2) 3.5 0.0035 3T3 fibroblasts TGAAAGAACA (6) 3.5 0.0035 3T3 fibroblasts TGAAGGAACA (3) 3.5 0.0035 E15 cortex AAAAAAAAAA (658) 212.8 0.2128 E15 cortex CAAAAAAAAA (157) 34.6 0.0346 E15 cortex CAATAAACTT 4.9 0.0049 E15 cortex GCCCTGGGGA (7) 4.9 0.0049 E15 cortex GCCGGGCGTG (2) 4.9 0.0049 E15 cortex GTCATAGCTG (590) 4.9 0.0049 P1 cortex AAAAAAAAAA (658) 245.4 0.2454 P1 cortex CAAAAAAAAA (157) 22.7 0.0227 P1 cortex TGAAGGAACA (3) 22.7 0.0227 P1 cortex CAATAAACTG (8) 13.6 0.0136 Hypothalamus AAAAAAAAAA (658) 123.2 0.1232 Hypothalamus CAATAAACTG (8) 77.9 0.0779 Hypothalamus CAAAAAAAAA (157) 39.8 0.0398 Hypothalamus TGAAGGAACA (3) 21.7 0.0217 Hypothalamus AAGGAGTTAC (5) 14.5 0.0145 Hypothalamus AACCTTCAGC (3) 9.1 0.0091 Hypothalamus CAATAAACTT 3.6 0.0036 Hypothalamus GGTTTTAACT (6) 3.6 0.0036 Hypothalamus CAATAAAAAG (6) 1.8 0.0018 E12.5 retina AAAAAAAAAA (658) 138.9 0.1389 E12.5 retina CAATAAACTG (8) 75.1 0.0751 E12.5 retina TGAAGGAACA (3) 30 0.03 E12.5 retina CAAAAAAAAA (157) 22.5 0.0225 E12.5 retina AACCTTCAGC (3) 1.9 0.0019 E12.5 retina AAGGAGTTAC (5) 1.9 0.0019 E12.5 retina GGTTTTAACT (6) 1.9 0.0019 E14.5 retina CAATAAACTG (8) 116.6 0.1166 E14.5 retina AAAAAAAAAA (658) 94.7 0.0947 E14.5 retina TGAAGGAACA (3) 29.2 0.0292 E14.5 retina AAGGAGTTAC (5) 10.9 0.0109 E14.5 retina GGTTTTAACT (6) 10.9 0.0109 E14.5 retina CAAAAAAAAA (157) 9.1 0.0091 E14.5 retina AACCTTCAGC (3) 5.5 0.0055 E14.5 retina GGTTTTAAGT (2) 3.6 0.0036 E14.5 retina AAGGGTGAGG (2) 1.8 0.0018 E14.5 retina CAATAAACTT 1.8 0.0018 E14.5 retina CGATAAACTG 1.8 0.0018 E14.5 retina GCACTGGCTC (3) 1.8 0.0018 E14.5 retina TCGCAACACC 1.8 0.0018 E16.5 retina CAATAAACTG (8) 81.5 0.0815 E16.5 retina TGAAGGAACA (3) 45.3 0.0453 E16.5 retina AAAAAAAAAA (658) 43.5 0.0435 E16.5 retina CAAAAAAAAA (157) 9.1 0.0091 E16.5 retina GGTTTTAACT (6) 5.4 0.0054 E16.5 retina TCGCAACACC 5.4 0.0054 E16.5 retina AACCTTCAGC (3) 3.6 0.0036 E16.5 retina AAGGGTGAGG (2) 1.8 0.0018 E16.5 retina CAATAAAAAG (6) 1.8 0.0018 E16.5 retina CTGTGTAGTC (4) 1.8 0.0018 E16.5 retina GGTTTTAAGT (2) 1.8 0.0018 E18.5 retina AAAAAAAAAA (658) 374.7 0.3747 E18.5 retina CAATAAACTG (8) 149.2 0.1492 E18.5 retina CAAAAAAAAA (157) 41.8 0.0418 E18.5 retina TGAAGGAACA (3) 29.1 0.0291 E18.5 retina AAGGAGTTAC (5) 9.1 0.0091 E18.5 retina CAATAAAAAG (6) 5.5 0.0055 E18.5 retina GCCCTGGGGA (7) 3.6 0.0036 E18.5 retina AACCTTCAGC (3) 1.8 0.0018 E18.5 retina AAGGGTGAGG (2) 1.8 0.0018 E18.5 retina CAATAAACTT 1.8 0.0018 E18.5 retina GCCGGGCGTG (2) 1.8 0.0018 E18.5 retina GGAAAAAAAT (11) 1.8 0.0018 P0.5 retina CAAAAAAAAA (157) 137.4 0.1374 P0.5 retina AAAAAAAAAA (658) 117.8 0.1178 P0.5 retina CAATAAACTG (8) 60.8 0.0608 P0.5 retina TGAAGGAACA (3) 51 0.051 P0.5 retina CGATAAACTG 3.9 0.0039 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P0.5 retina CTGTGTAGTC (4) 2 0.002 P2.5 retina AAAAAAAAAA (658) 329.1 0.3291 P2.5 retina CAATAAACTG (8) 88 0.088 P2.5 retina CAAAAAAAAA (157) 52.8 0.0528 P2.5 retina TGAAGGAACA (3) 26.4 0.0264 P2.5 retina CAATAAAAAG (6) 3.5 0.0035 P2.5 retina AACCTTCAGC (3) 1.8 0.0018 P2.5 retina GCACTGGCTC (3) 1.8 0.0018 P2.5 retina GCCCTGGGGA (7) 1.8 0.0018 P2.5 retina GGAAAAAAAT (11) 1.8 0.0018 P2.5 retina GGTTTTAACT (6) 1.8 0.0018 P2.5 retina GGTTTTAAGT (2) 1.8 0.0018 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P4.5 retina AAAAAAAAAA (658) 283.3 0.2833 P4.5 retina CAATAAACTG (8) 105 0.105 P4.5 retina TGAAGGAACA (3) 53.5 0.0535 P4.5 retina CAAAAAAAAA (157) 41.6 0.0416 P4.5 retina GGTTTTAACT (6) 4 0.004 P4.5 retina AACCTTCAGC (3) 2 0.002 P4.5 retina CAATTAACTG (4) 2 0.002 P4.5 retina GCACTGGCTC (3) 2 0.002 P4.5 retina GTCATAGCTG (590) 2 0.002 P6.5 retina AAAAAAAAAA (658) 266.8 0.2668 P6.5 retina CAATAAACTG (8) 73.4 0.0734 P6.5 retina TGAAGGAACA (3) 48.4 0.0484 P6.5 retina CAAAAAAAAA (157) 31.7 0.0317 P6.5 retina AAGGAGTTAC (5) 3.3 0.0033 P6.5 retina AAGGGTGAGG (2) 3.3 0.0033 P6.5 retina GCCGGGCGTG (2) 3.3 0.0033 P6.5 retina GGTTTTAACT (6) 3.3 0.0033 P6.5 retina GGTTTTAAGT (2) 3.3 0.0033 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P6.5 retina CAATAAAAAG (6) 1.7 0.0017 P6.5 retina GGAAAAAAAT (11) 1.7 0.0017 P10.5 crx- retina TGAAGGAACA (3) 59.4 0.0594 P10.5 crx- retina AAAAAAAAAA (658) 44.6 0.0446 P10.5 crx- retina CAATAAACTG (8) 27.9 0.0279 P10.5 crx- retina CAAAAAAAAA (157) 13 0.013 P10.5 crx- retina AACCTTCAGC (3) 3.7 0.0037 P10.5 crx- retina AAGGGTGAGG (2) 3.7 0.0037 P10.5 crx- retina GCACTGGCTC (3) 3.7 0.0037 P10.5 crx- retina GGTTTTAAGT (2) 3.7 0.0037 P10.5 crx- retina TGAAAGAACA (6) 1.9 0.0019 P10.5 crx+ retina AAAAAAAAAA (658) 96.1 0.0961 P10.5 crx+ retina CAATAAACTG (8) 48.1 0.0481 P10.5 crx+ retina TGAAGGAACA (3) 38.4 0.0384 P10.5 crx+ retina CAAAAAAAAA (157) 32.7 0.0327 P10.5 crx+ retina AACCTTCAGC (3) 1.9 0.0019 P10.5 crx+ retina GCCCTGGGGA (7) 1.9 0.0019 P10.5 crx+ retina GGTTTTAACT (6) 1.9 0.0019 P10.5 crx+ retina TCGCAACACC 1.9 0.0019 Adult retinal AAAAAAAAAA (658) 57.4 0.0574 Adult retinal CAATAAACTG (8) 40.7 0.0407 Adult retinal TGAAGGAACA (3) 27.8 0.0278 Adult retinal CAAAAAAAAA (157) 20.4 0.0204 Adult retinal GCCCTGGGGA (7) 5.6 0.0056 Adult retinal CAATAAACTT 1.9 0.0019 Adult retinal GTCATAGCTG (590) 1.9 0.0019 Adult retinal TCGCAACACC 1.9 0.0019 Adult retinal TGAAAGAACA (6) 1.9 0.0019 ONL AAAAAAAAAA (658) 103.4 0.1034 ONL CAATAAACTG (8) 40.2 0.0402 ONL TGAAGGAACA (3) 26.8 0.0268 ONL CAAAAAAAAA (157) 17.2 0.0172 ONL GTCATAGCTG (590) 5.7 0.0057 ONL GGAAAAAAAT (11) 1.9 0.0019 ONL GGTTTTAACT (6) 1.9 0.0019