Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.139127
AW742696
expressed sequence AW742696
11
104678
Mm.139127
Zcwcc1
zinc finger, CW-type with coiled-coil domain 1
11
74522
Mm.139127
AI316828
expressed sequence AI316828
11
103674
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 47 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGCTTCAGAC
(
9
)
9.8
0.0098
P8 Cb GC
TAATCAAAAT
(
3
)
3.3
0.0033
P8 Cb GC
TTTCCTTCCA (
5
)
3.3
0.0033
Cb medulloblastoma
TGCTTCAGAC
(
9
)
2.3
0.0023
P8 GC+1d culture
TGCTTCAGAC
(
9
)
2.3
0.0023
P8 GC+1d culture
ATGTTCCCAG (
5
)
1.1
0.0011
P8 GC+1d culture
TAATCAAAAT
(
3
)
1.1
0.0011
P8 GC+1d culture
TGAGACATTT
(
6
)
1.1
0.0011
P8 GC+SHH+1d culture
TGCTTCAGAC
(
9
)
2.3
0.0023
P8 GC+SHH+1d culture
ATGTTCCCAG (
5
)
1.2
0.0012
P8 GC+SHH+1d culture
GTGGGGAAAG (
10
)
1.2
0.0012
P8 GC+SHH+1d culture
TAATCAAAAT
(
3
)
1.2
0.0012
P8 GC+SHH+1d culture
TGAGACATTT
(
6
)
1.2
0.0012
3T3 fibroblasts
CCTGGCTTGC (
6
)
7
0.007
3T3 fibroblasts
TGCTTCAGAC
(
9
)
3.5
0.0035
P1 cortex
ATGTTCCCAG (
5
)
4.5
0.0045
P1 cortex
CCTGGCTTGC (
6
)
4.5
0.0045
Hypothalamus
TGCTTCAGAC
(
9
)
5.4
0.0054
Hypothalamus
ATGTTCCCAG (
5
)
1.8
0.0018
Hypothalamus
TGAGACATTT
(
6
)
1.8
0.0018
E12.5 retina
TGCTTCAGAC
(
9
)
5.6
0.0056
E12.5 retina
GTGGGGAAAG (
10
)
1.9
0.0019
E14.5 retina
TAATCAAAAT
(
3
)
3.6
0.0036
E16.5 retina
TAATCAAAAT
(
3
)
3.6
0.0036
E16.5 retina
TGAGACATTT
(
6
)
1.8
0.0018
E16.5 retina
TGCTTCAGAC
(
9
)
1.8
0.0018
E18.5 retina
TAATCAAAAT
(
3
)
3.6
0.0036
P0.5 retina
TGCTTCAGAC
(
9
)
3.9
0.0039
P0.5 retina
TAATCAAAAT
(
3
)
2
0.002
P2.5 retina
TAATCAAAAT
(
3
)
8.8
0.0088
P4.5 retina
TGCTTCAGAC
(
9
)
2
0.002
P4.5 retina
TTTCCTTCCA (
5
)
2
0.002
P6.5 retina
ATGTTCCCAG (
5
)
1.7
0.0017
P6.5 retina
TAATCAAAAT
(
3
)
1.7
0.0017
P6.5 retina
TGCTTCAGAC
(
9
)
1.7
0.0017
P10.5 crx- retina
TGCTTCAGAC
(
9
)
5.6
0.0056
P10.5 crx- retina
TAATCAAAAT
(
3
)
3.7
0.0037
P10.5 crx- retina
ATGTTCCCAG (
5
)
1.9
0.0019
P10.5 crx+ retina
TGCTTCAGAC
(
9
)
1.9
0.0019
P10.5 crx+ retina
TTTCCTTCCA (
5
)
1.9
0.0019
Adult retinal
GTGGGGAAAG (
10
)
1.9
0.0019
Adult retinal
TGCTTCAGAC
(
9
)
1.9
0.0019
ONL
ATGTTCCCAG (
5
)
1.9
0.0019
ONL
CCTGGCTTGC (
6
)
1.9
0.0019
ONL
GTGGGGAAAG (
10
)
1.9
0.0019
ONL
TAATCAAAAT
(
3
)
1.9
0.0019
ONL
TGCTTCAGAC
(
9
)
1.9
0.0019
