Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.1401	Cxcr4	chemokine (C-X-C motif) receptor 4	1	1 67.4 cM	12767
Gene Ontology	brain development | C-C chemokine receptor activity | chemokine receptor activity | chemotaxis | C-X-C chemokine receptor activity | defense response | germ-cell development | germ-cell migration | G-protein coupled receptor activity | G-protein coupled receptor protein signaling pathway | integral to membrane | purinergic nucleotide receptor activity, G-protein coupled | regulation of cell migration | rhodopsin-like receptor activity | T-cell proliferation
Human Homolog	CXCR4[chemokine (C-X-C motif) receptor 4]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 28 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGAATGAGCG 3.3 0.0033 P8 Cb GC TGAATGAGTG 1.6 0.0016 P8 GC+1d culture AGCAGAGGCT (2) 1.1 0.0011 P8 GC+1d culture TGAATGAGCG 1.1 0.0011 P8 GC+1d culture TGAATGAGTG 1.1 0.0011 P8 GC+SHH+1d culture GAACCGATCA (5) 3.5 0.0035 P8 GC+SHH+1d culture AGCAGAGGCT (2) 2.3 0.0023 P8 GC+SHH+1d culture TGAATGAGCG 2.3 0.0023 P8 GC+SHH+1d culture TGAATGAGTG 1.2 0.0012 E15 cortex TGAATGAGTG 4.9 0.0049 Hypothalamus GAACCGATCA (5) 1.8 0.0018 Hypothalamus TCAGGGTGGG 1.8 0.0018 E12.5 retina GAACCGATCA (5) 5.6 0.0056 E14.5 retina GAACCGATCA (5) 1.8 0.0018 E16.5 retina GAACCGATCA (5) 3.6 0.0036 E18.5 retina GAACCGATCA (5) 1.8 0.0018 E18.5 retina TCAGGGTGGG 1.8 0.0018 P0.5 retina TGAATGAGTG 3.9 0.0039 P2.5 retina TGAATGAGTG 3.5 0.0035 P2.5 retina TCAGGGTGGG 1.8 0.0018 P4.5 retina GAACCGATCA (5) 4 0.004 P6.5 retina GAACCGATCA (5) 5 0.005 P10.5 crx- retina GAACCGATCA (5) 3.7 0.0037 P10.5 crx- retina AGCAGAGGCT (2) 1.9 0.0019 P10.5 crx+ retina TCAGGGTGGG 3.8 0.0038 P10.5 crx+ retina GAACCGATCA (5) 1.9 0.0019 Adult retinal TGAATGAGTG 1.9 0.0019 ONL GAACCGATCA (5) 1.9 0.0019