Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.140380	Rpl23	ribosomal protein L23	11	11 D (11 58.0 cM)	65019
Gene Ontology	cytosolic ribosome (sensu Eukarya) | intracellular | nucleolus | protein biosynthesis | ribosomal protein-nucleus import | ribosome | structural constituent of ribosome
Human Homolog	RPL23[ribosomal protein L23]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 9 In Situ Hybridization Images

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SAGE Tags

Total 125 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATTCTCCAGT (5) 156.6 0.1566 P8 Cb GC CAATGCTGCC (2) 14.7 0.0147 P8 Cb GC CACATATGGT (4) 1.6 0.0016 P8 Cb GC TTGAAGCTGA (6) 1.6 0.0016 Cb medulloblastoma ATTCTCCAGT (5) 60.1 0.0601 Cb medulloblastoma ATTTTCCAGT 2.3 0.0023 Cb medulloblastoma CAATGCTGCC (2) 2.3 0.0023 P8 GC+1d culture ATTCTCCAGT (5) 134.7 0.1347 P8 GC+1d culture CAATGCTGCC (2) 4.6 0.0046 P8 GC+1d culture ATTCTCCAGC (2) 1.1 0.0011 P8 GC+1d culture CACATATGGT (4) 1.1 0.0011 P8 GC+1d culture GGGAACCCCT (9) 1.1 0.0011 P8 GC+1d culture GTGATGGCCA (2) 1.1 0.0011 P8 GC+1d culture TCCCCAACAC (3) 1.1 0.0011 P8 GC+SHH+1d culture ATTCTCCAGT (5) 162.8 0.1628 P8 GC+SHH+1d culture CAATGCTGCC (2) 11.7 0.0117 P8 GC+SHH+1d culture ACTAGTGCTT (80) 1.2 0.0012 P8 GC+SHH+1d culture ATTCTCCAGG (2) 1.2 0.0012 P8 GC+SHH+1d culture CACATATGGT (4) 1.2 0.0012 P8 GC+SHH+1d culture TTGAAGCTGA (6) 1.2 0.0012 3T3 fibroblasts ATTCTCCAGT (5) 91.1 0.0911 3T3 fibroblasts CAATGCTGCC (2) 3.5 0.0035 3T3 fibroblasts TCCCCAACAC (3) 3.5 0.0035 E15 cortex ATTCTCCAGT (5) 49.5 0.0495 E15 cortex GTGATGGCCA (2) 9.9 0.0099 P1 cortex ATTCTCCAGT (5) 90.9 0.0909 P1 cortex GGGAACCCCT (9) 9.1 0.0091 P1 cortex ATTCTCCAGG (2) 4.5 0.0045 P1 cortex TTGAAGCTGA (6) 4.5 0.0045 Hypothalamus ATTCTCCAGT (5) 65.2 0.0652 Hypothalamus CAATGCTGCC (2) 9.1 0.0091 Hypothalamus CACATATGGT (4) 5.4 0.0054 Hypothalamus GTGATGGCCA (2) 3.6 0.0036 Hypothalamus ATTCTCCAGG (2) 1.8 0.0018 Hypothalamus TGCATACATA (14) 1.8 0.0018 Hypothalamus TTGAAGCTGA (6) 1.8 0.0018 E12.5 retina ATTCTCCAGT (5) 322.9 0.3229 E12.5 retina CACATATGGT (4) 13.1 0.0131 E12.5 retina CAATGCTGCC (2) 7.5 0.0075 E12.5 retina ACTAGTGCTT (80) 1.9 0.0019 E12.5 retina ATTCTCCAGC (2) 1.9 0.0019 E12.5 retina ATTCTCCAGG (2) 1.9 0.0019 E12.5 retina GGGAACCCCT (9) 1.9 0.0019 E12.5 retina TCCCCAACAC (3) 1.9 0.0019 E14.5 retina ATTCTCCAGT (5) 229.6 0.2296 E14.5 retina CAATGCTGCC (2) 43.7 0.0437 E14.5 retina CACATATGGT (4) 10.9 0.0109 E14.5 retina GTGATGGCCA (2) 7.3 0.0073 E14.5 retina TTGAAGCTGA (6) 5.5 0.0055 E14.5 retina ATTCTCCAGG (2) 3.6 0.0036 E14.5 retina TCCCCAACAC (3) 3.6 0.0036 E14.5 retina GGGAACCCCT (9) 1.8 0.0018 E16.5 retina ATTCTCCAGT (5) 228.2 0.2282 E16.5 retina CAATGCTGCC (2) 34.4 0.0344 E16.5 retina GTGATGGCCA (2) 18.1 0.0181 E16.5 retina CACATATGGT (4) 5.4 0.0054 E16.5 retina GGGAACCCCT (9) 5.4 0.0054 E16.5 retina ATTCTCCAGG (2) 3.6 0.0036 E16.5 retina ATTCCCCAGT (3) 1.8 0.0018 E16.5 retina ATTTTCCAGT 1.8 0.0018 E16.5 retina TTGAAGCTGA (6) 1.8 0.0018 E18.5 retina ATTCTCCAGT (5) 227.4 0.2274 E18.5 retina CAATGCTGCC (2) 12.7 0.0127 E18.5 retina CACATATGGT (4) 12.7 0.0127 E18.5 retina GTGATGGCCA (2) 5.5 0.0055 E18.5 retina GGGAACCCCT (9) 3.6 0.0036 E18.5 retina ATTCTCCACG 1.8 0.0018 E18.5 retina ATTCTCCAGG (2) 1.8 0.0018 E18.5 retina ATTTTCCAGT 1.8 0.0018 E18.5 retina TGCATACATA (14) 1.8 0.0018 P0.5 retina ATTCTCCAGT (5) 172.7 0.1727 P0.5 retina CAATGCTGCC (2) 11.8 0.0118 P0.5 retina GGGAACCCCT (9) 11.8 0.0118 P0.5 retina CACATATGGT (4) 5.9 0.0059 P0.5 retina GTGATGGCCA (2) 3.9 0.0039 P0.5 retina ATTCTCCAGC (2) 2 0.002 P0.5 retina TGCATACATA (14) 2 0.002 P0.5 retina TTGAAGCTGA (6) 2 0.002 P2.5 retina ATTCTCCAGT (5) 140.8 0.1408 P2.5 retina ATTCTCCAGG (2) 3.5 0.0035 P2.5 retina CAATGCTGCC (2) 3.5 0.0035 P2.5 retina CACATATGGT (4) 3.5 0.0035 P2.5 retina GGGAACCCCT (9) 3.5 0.0035 P2.5 retina TGCATACATA (14) 3.5 0.0035 P2.5 retina ATTCTCCAGC (2) 1.8 0.0018 P2.5 retina GTGATGGCCA (2) 1.8 0.0018 P2.5 retina TCCCCAACAC (3) 1.8 0.0018 P2.5 retina TTGAAGCTGA (6) 1.8 0.0018 P4.5 retina ATTCTCCAGT (5) 182.3 0.1823 P4.5 retina ATTCTCCAGG (2) 4 0.004 P4.5 retina CAATGCTGCC (2) 4 0.004 P4.5 retina GGGAACCCCT (9) 4 0.004 P4.5 retina ACTAGTGCTT (80) 2 0.002 P4.5 retina CACATATGGT (4) 2 0.002 P4.5 retina GTGATGGCCA (2) 2 0.002 P4.5 retina TGCATACATA (14) 2 0.002 P6.5 retina ATTCTCCAGT (5) 100 0.1 P6.5 retina CAATGCTGCC (2) 6.7 0.0067 P6.5 retina CACATATGGT (4) 5 0.005 P6.5 retina TCCCCAACAC (3) 3.3 0.0033 P6.5 retina ATTCTCCAGG (2) 1.7 0.0017 P6.5 retina TGCATACATA (14) 1.7 0.0017 P10.5 crx- retina ATTCTCCAGT (5) 94.7 0.0947 P10.5 crx- retina CACATATGGT (4) 5.6 0.0056 P10.5 crx- retina ATTCCCCAGT (3) 1.9 0.0019 P10.5 crx- retina ATTCTCCAGG (2) 1.9 0.0019 P10.5 crx- retina ATTTTCCAGT 1.9 0.0019 P10.5 crx- retina CAATGCTGCC (2) 1.9 0.0019 P10.5 crx- retina GTGATGGCCA (2) 1.9 0.0019 P10.5 crx- retina TCCCCAACAC (3) 1.9 0.0019 P10.5 crx- retina TTGAAGCTGA (6) 1.9 0.0019 P10.5 crx+ retina ATTCTCCAGT (5) 61.5 0.0615 P10.5 crx+ retina ATTCTCCACG 3.8 0.0038 P10.5 crx+ retina CACATATGGT (4) 3.8 0.0038 P10.5 crx+ retina ATTCTCCAGC (2) 1.9 0.0019 P10.5 crx+ retina ATTTTCCAGT 1.9 0.0019 P10.5 crx+ retina CAATGCTGCC (2) 1.9 0.0019 P10.5 crx+ retina GGGAACCCCT (9) 1.9 0.0019 P10.5 crx+ retina TGCATACATA (14) 1.9 0.0019 Adult retinal ATTCTCCAGT (5) 55.5 0.0555 Adult retinal CAATGCTGCC (2) 3.7 0.0037 Adult retinal GGGAACCCCT (9) 1.9 0.0019 ONL ATTCTCCAGT (5) 49.8 0.0498 ONL ATTTTCCAGT 3.8 0.0038 ONL GTGATGGCCA (2) 1.9 0.0019