Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.1415	Epas1	endothelial PAS domain protein 1	17		13819
Gene Ontology	angiogenesis | development | DNA binding | nucleus | regulation of transcription, DNA-dependent | response to hypoxia | signal transducer activity | signal transduction | transcription factor activity
Human Homolog	EPAS1[endothelial PAS domain protein 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 43 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTGGCTGGTG (10) 22.8 0.0228 P8 Cb GC GGTGAGACAC (2) 3.3 0.0033 Cb medulloblastoma GTGGCTGGTG (10) 6.9 0.0069 Cb medulloblastoma TTTTAAAAAT (4) 2.3 0.0023 P8 GC+1d culture GTGGCTGGTG (10) 14.8 0.0148 P8 GC+1d culture AGCCAACTCA 1.1 0.0011 P8 GC+SHH+1d culture GTGGCTGGTG (10) 17.6 0.0176 P8 GC+SHH+1d culture AGCCAACTCA 1.2 0.0012 3T3 fibroblasts GTGGCTGGTG (10) 21 0.021 E15 cortex GTGGCTGGTG (10) 14.8 0.0148 P1 cortex GTGGCTGGTG (10) 9.1 0.0091 P1 cortex TTTTAAAAAT (4) 4.5 0.0045 Hypothalamus GTGGCTGGTG (10) 12.7 0.0127 Hypothalamus AGCCAACTCA 3.6 0.0036 Hypothalamus GCCCCCGATG (2) 3.6 0.0036 E12.5 retina GTGGCTGGTG (10) 22.5 0.0225 E12.5 retina GGGGCTCCCA (6) 5.6 0.0056 E12.5 retina GGTGAGACAC (2) 1.9 0.0019 E14.5 retina GTGGCTGGTG (10) 21.9 0.0219 E16.5 retina GTGGCTGGTG (10) 23.5 0.0235 E16.5 retina GGGGCTCCCA (6) 3.6 0.0036 E18.5 retina GTGGCTGGTG (10) 21.8 0.0218 E18.5 retina TTTTAAAAAT (4) 3.6 0.0036 P0.5 retina GTGGCTGGTG (10) 17.7 0.0177 P2.5 retina GTGGCTGGTG (10) 21.1 0.0211 P2.5 retina GGGGCTCCCA (6) 3.5 0.0035 P2.5 retina GCCCCCGATG (2) 1.8 0.0018 P2.5 retina TTTTAAAAAT (4) 1.8 0.0018 P4.5 retina GTGGCTGGTG (10) 21.8 0.0218 P4.5 retina TTTTAAAAAT (4) 2 0.002 P6.5 retina GTGGCTGGTG (10) 15 0.015 P6.5 retina TTTTAAAAAT (4) 1.7 0.0017 P10.5 crx- retina GTGGCTGGTG (10) 5.6 0.0056 P10.5 crx- retina TTTTAAAAAT (4) 1.9 0.0019 P10.5 crx+ retina GTGGCTGGTG (10) 13.5 0.0135 P10.5 crx+ retina TTTTAAAAAT (4) 1.9 0.0019 Adult retinal GTGGCTGGTG (10) 11.1 0.0111 Adult retinal GCCCCCGATG (2) 5.6 0.0056 Adult retinal GGTGAGACAC (2) 1.9 0.0019 ONL GTGGCTGGTG (10) 9.6 0.0096 ONL GCCCCCGATG (2) 5.7 0.0057 ONL TTTTAAAAAT (4) 5.7 0.0057 ONL GGGGCTCCCA (6) 3.8 0.0038