Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.142187
2610009E16Rik
RIKEN cDNA 2610009E16 gene
6
69202
Human Homolog
PTMS[parathymosin]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 71 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AACCCCTGCC
(
3
)
6.5
0.0065
P8 Cb GC
GCAACAACAC
4.9
0.0049
P8 Cb GC
TCGGAGAAGA
(
4
)
4.9
0.0049
P8 Cb GC
CCGACGCCCC (
3
)
1.6
0.0016
Cb medulloblastoma
GCAACAACAC
23.1
0.0231
Cb medulloblastoma
TCGGAGAAGA
(
4
)
9.2
0.0092
Cb medulloblastoma
AACCCCTGCC
(
3
)
2.3
0.0023
P8 GC+1d culture
AACCCCTGCC
(
3
)
82.2
0.0822
P8 GC+1d culture
CCGACGCCCC (
3
)
4.6
0.0046
P8 GC+1d culture
TCGGAGAAGA
(
4
)
2.3
0.0023
P8 GC+1d culture
GGACATTTAA (
5
)
1.1
0.0011
P8 GC+SHH+1d culture
AACCCCTGCC
(
3
)
46.8
0.0468
P8 GC+SHH+1d culture
CCGACGCCCC (
3
)
8.2
0.0082
P8 GC+SHH+1d culture
TCGGAGAAGA
(
4
)
1.2
0.0012
3T3 fibroblasts
AACCCCTGCC
(
3
)
77.1
0.0771
3T3 fibroblasts
GCAACAACAC
10.5
0.0105
3T3 fibroblasts
TCGGAGAAGA
(
4
)
7
0.007
3T3 fibroblasts
CCGACGCCCC (
3
)
3.5
0.0035
E15 cortex
AACCCCTGCC
(
3
)
74.2
0.0742
E15 cortex
TCGGAGAAGA
(
4
)
39.6
0.0396
E15 cortex
GGGACGGAGG
4.9
0.0049
P1 cortex
AACCCCTGCC
(
3
)
54.5
0.0545
P1 cortex
TCGGAGAAGA
(
4
)
9.1
0.0091
Hypothalamus
AACCCCTGCC
(
3
)
10.9
0.0109
Hypothalamus
CCGACGCCCC (
3
)
7.2
0.0072
Hypothalamus
CTATGGCCCT (
3
)
1.8
0.0018
Hypothalamus
GCAACAACAC
1.8
0.0018
E12.5 retina
AACCCCTGCC
(
3
)
9.4
0.0094
E12.5 retina
TCGGAGAAGA
(
4
)
3.8
0.0038
E12.5 retina
CCGACGCCCC (
3
)
1.9
0.0019
E14.5 retina
AACCCCTGCC
(
3
)
12.8
0.0128
E14.5 retina
CCGACGCCCC (
3
)
9.1
0.0091
E14.5 retina
TCGGAGAAGA
(
4
)
3.6
0.0036
E16.5 retina
CCGACGCCCC (
3
)
14.5
0.0145
E16.5 retina
AACCCCTGCC
(
3
)
9.1
0.0091
E16.5 retina
TCGGAGAAGA
(
4
)
3.6
0.0036
E16.5 retina
CCCCAGAGCT
(
3
)
1.8
0.0018
E18.5 retina
AACCCCTGCC
(
3
)
12.7
0.0127
E18.5 retina
CCGACGCCCC (
3
)
1.8
0.0018
E18.5 retina
TCGGAGAAGA
(
4
)
1.8
0.0018
P0.5 retina
AACCCCTGCC
(
3
)
64.8
0.0648
P0.5 retina
CCGACGCCCC (
3
)
3.9
0.0039
P0.5 retina
TCGGAGAAGA
(
4
)
3.9
0.0039
P2.5 retina
AACCCCTGCC
(
3
)
24.6
0.0246
P2.5 retina
TCGGAGAAGA
(
4
)
5.3
0.0053
P2.5 retina
CCGACGCCCC (
3
)
3.5
0.0035
P2.5 retina
GGACATTTAA (
5
)
1.8
0.0018
P4.5 retina
AACCCCTGCC
(
3
)
21.8
0.0218
P4.5 retina
CCGACGCCCC (
3
)
13.9
0.0139
P4.5 retina
TCGGAGAAGA
(
4
)
7.9
0.0079
P4.5 retina
GGACATTTAA (
5
)
4
0.004
P4.5 retina
CCCCAGAGCT
(
3
)
2
0.002
P6.5 retina
AACCCCTGCC
(
3
)
45
0.045
P6.5 retina
CCGACGCCCC (
3
)
5
0.005
P6.5 retina
TCGGAGAAGA
(
4
)
5
0.005
P10.5 crx- retina
AACCCCTGCC
(
3
)
42.7
0.0427
P10.5 crx- retina
TCGGAGAAGA
(
4
)
9.3
0.0093
P10.5 crx- retina
CCGACGCCCC (
3
)
5.6
0.0056
P10.5 crx- retina
CCCCAGAGCT
(
3
)
3.7
0.0037
P10.5 crx+ retina
AACCCCTGCC
(
3
)
21.1
0.0211
P10.5 crx+ retina
GCAACAACAC
7.7
0.0077
P10.5 crx+ retina
TCGGAGAAGA
(
4
)
5.8
0.0058
P10.5 crx+ retina
GGGACGGAGG
1.9
0.0019
Adult retinal
AACCCCTGCC
(
3
)
29.6
0.0296
Adult retinal
CCGACGCCCC (
3
)
1.9
0.0019
Adult retinal
GCAACAACAC
1.9
0.0019
Adult retinal
GGGACGGAGG
1.9
0.0019
ONL
AACCCCTGCC
(
3
)
11.5
0.0115
ONL
GGGACGGAGG
3.8
0.0038
ONL
CCGACGCCCC (
3
)
1.9
0.0019
ONL
CTATGGCCCT (
3
)
1.9
0.0019
