Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.143768	Fbxo3	F-box only protein 3	2		57443
Human Homolog	FBXO3[F-box protein 3]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 177 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTCAAAAAAA (25) 13.1 0.0131 P8 Cb GC TCAGTATGTA (2) 11.4 0.0114 P8 Cb GC GATATTTTTT (6) 6.5 0.0065 P8 Cb GC CGATTTGTAC (3) 4.9 0.0049 P8 Cb GC GAAGGGTATT (5) 4.9 0.0049 P8 Cb GC AAGAATCTTT (7) 3.3 0.0033 P8 Cb GC GAATTTTTTT (5) 1.6 0.0016 P8 Cb GC GCCATCTTCC (8) 1.6 0.0016 P8 Cb GC TGTTTGTGTT (11) 1.6 0.0016 P8 Cb GC TTTCACAAAA (3) 1.6 0.0016 Cb medulloblastoma TTCAAAAAAA (25) 37 0.037 Cb medulloblastoma AAATTTGTTC (3) 6.9 0.0069 Cb medulloblastoma TGTTTTTGTT (5) 6.9 0.0069 Cb medulloblastoma GAAGGGTATT (5) 4.6 0.0046 Cb medulloblastoma GAATTTTTTT (5) 4.6 0.0046 Cb medulloblastoma TTCAACCCTC 4.6 0.0046 Cb medulloblastoma GATATTTTTT (6) 2.3 0.0023 Cb medulloblastoma TCAGTATGTA (2) 2.3 0.0023 Cb medulloblastoma TTTATTTATA (6) 2.3 0.0023 P8 GC+1d culture GATATTTTTT (6) 36.5 0.0365 P8 GC+1d culture TTCAAAAAAA (25) 12.6 0.0126 P8 GC+1d culture TCAGTATGTA (2) 9.1 0.0091 P8 GC+1d culture GCCATCTTCC (8) 8 0.008 P8 GC+1d culture CGATTTGTAC (3) 3.4 0.0034 P8 GC+1d culture TGTTTTTGTT (5) 2.3 0.0023 P8 GC+1d culture GAAGGGTATT (5) 1.1 0.0011 P8 GC+1d culture GATACTTTTT (5) 1.1 0.0011 P8 GC+1d culture TTCAACCCTC 1.1 0.0011 P8 GC+1d culture TTTATTTATA (6) 1.1 0.0011 P8 GC+SHH+1d culture TTCAAAAAAA (25) 29.3 0.0293 P8 GC+SHH+1d culture GATATTTTTT (6) 25.8 0.0258 P8 GC+SHH+1d culture TCAGTATGTA (2) 10.5 0.0105 P8 GC+SHH+1d culture AAATTTGTTC (3) 5.9 0.0059 P8 GC+SHH+1d culture GCCATCTTCC (8) 5.9 0.0059 P8 GC+SHH+1d culture TGTTTTTGTT (5) 3.5 0.0035 P8 GC+SHH+1d culture CGATTTGTAC (3) 1.2 0.0012 P8 GC+SHH+1d culture GAATTTTTTT (5) 1.2 0.0012 P8 GC+SHH+1d culture GTGGCACATA (5) 1.2 0.0012 P8 GC+SHH+1d culture TTCAACCCTC 1.2 0.0012 P8 GC+SHH+1d culture TTTATTTATA (6) 1.2 0.0012 3T3 fibroblasts GCCATCTTCC (8) 7 0.007 3T3 fibroblasts GTGGCACATA (5) 3.5 0.0035 3T3 fibroblasts TGCCTTTGCT (4) 3.5 0.0035 E15 cortex TTCAAAAAAA (25) 29.7 0.0297 E15 cortex GATATTTTTT (6) 14.8 0.0148 E15 cortex GAAGGGTATT (5) 4.9 0.0049 E15 cortex GAATTTTTTT (5) 4.9 0.0049 E15 cortex GCCATCTTCC (8) 4.9 0.0049 E15 cortex GTGGCACATA (5) 4.9 0.0049 P1 cortex GATATTTTTT (6) 9.1 0.0091 P1 cortex GTTGTTAACA (2) 9.1 0.0091 P1 cortex AAATTTGTTC (3) 4.5 0.0045 P1 cortex GCCATCTTCC (8) 4.5 0.0045 P1 cortex TCAGTATGTA (2) 4.5 0.0045 P1 cortex TGCCTTTGCT (4) 4.5 0.0045 P1 cortex TGTTTTTGTT (5) 4.5 0.0045 P1 cortex TTCAAAAAAA (25) 4.5 0.0045 Hypothalamus TCAGTATGTA (2) 9.1 0.0091 Hypothalamus TGTTTTTGTT (5) 9.1 0.0091 Hypothalamus TTCAAAAAAA (25) 7.2 0.0072 Hypothalamus GCCATCTTCC (8) 5.4 0.0054 Hypothalamus AAATTTGTTC (3) 3.6 0.0036 Hypothalamus GAAGGGTATT (5) 3.6 0.0036 Hypothalamus GATATTTTTT (6) 3.6 0.0036 Hypothalamus GTTGTTAACA (2) 1.8 0.0018 Hypothalamus TTCAACCCTC 1.8 0.0018 E12.5 retina TTCAAAAAAA (25) 9.4 0.0094 E12.5 retina GATATTTTTT (6) 7.5 0.0075 E12.5 retina GCCATCTTCC (8) 3.8 0.0038 E12.5 retina TCAGTATGTA (2) 3.8 0.0038 E12.5 retina TGTTTTTGTT (5) 3.8 0.0038 E12.5 retina AAATTTGTTC (3) 1.9 0.0019 E12.5 retina AAGAATCTTT (7) 1.9 0.0019 E12.5 retina CGATTTGTAC (3) 1.9 0.0019 E12.5 retina GAAGGGTATT (5) 1.9 0.0019 E12.5 retina TTCAACCCTC 1.9 0.0019 E14.5 retina TTCAAAAAAA (25) 20 0.02 E14.5 retina GATATTTTTT (6) 10.9 0.0109 E14.5 retina TCAGTATGTA (2) 9.1 0.0091 E14.5 retina TGTTTTTGTT (5) 5.5 0.0055 E14.5 retina AAATTTGTTC (3) 1.8 0.0018 E14.5 retina AAGAATCTTT (7) 1.8 0.0018 E14.5 retina GAAGGGTATT (5) 1.8 0.0018 E14.5 retina GCCATCTTCC (8) 1.8 0.0018 E14.5 retina GTGGCACATA (5) 1.8 0.0018 E16.5 retina GATATTTTTT (6) 10.9 0.0109 E16.5 retina TTCAAAAAAA (25) 9.1 0.0091 E16.5 retina AAATTTGTTC (3) 5.4 0.0054 E16.5 retina GCCATCTTCC (8) 5.4 0.0054 E16.5 retina TCAGTATGTA (2) 5.4 0.0054 E16.5 retina CGATTTGTAC (3) 3.6 0.0036 E16.5 retina GTGGCACATA (5) 3.6 0.0036 E16.5 retina AAGAATCTTT (7) 1.8 0.0018 E16.5 retina GAAGGGTATT (5) 1.8 0.0018 E18.5 retina TTCAAAAAAA (25) 36.4 0.0364 E18.5 retina GATATTTTTT (6) 12.7 0.0127 E18.5 retina TCAGTATGTA (2) 9.1 0.0091 E18.5 retina GAAGGGTATT (5) 7.3 0.0073 E18.5 retina TGTTTTTGTT (5) 7.3 0.0073 E18.5 retina CGATTTGTAC (3) 3.6 0.0036 E18.5 retina GCCATCTTCC (8) 3.6 0.0036 E18.5 retina TTTATTTATA (6) 3.6 0.0036 P0.5 retina TTCAAAAAAA (25) 9.8 0.0098 P0.5 retina GATATTTTTT (6) 7.9 0.0079 P0.5 retina AAATTTGTTC (3) 3.9 0.0039 P0.5 retina GCCATCTTCC (8) 3.9 0.0039 P0.5 retina GAAGGGTATT (5) 2 0.002 P0.5 retina GAATTTTTTT (5) 2 0.002 P0.5 retina TCAGTATGTA (2) 2 0.002 P0.5 retina TGCCTTTGCT (4) 2 0.002 P0.5 retina TGTTTGTGTT (11) 2 0.002 P0.5 retina TTCAACCCTC 2 0.002 P2.5 retina GATATTTTTT (6) 12.3 0.0123 P2.5 retina TTCAAAAAAA (25) 7 0.007 P2.5 retina GAAGGGTATT (5) 5.3 0.0053 P2.5 retina TCAGTATGTA (2) 5.3 0.0053 P2.5 retina CGATTTGTAC (3) 3.5 0.0035 P2.5 retina TTTATTTATA (6) 3.5 0.0035 P2.5 retina AAATTTGTTC (3) 1.8 0.0018 P2.5 retina AAGAATCTTT (7) 1.8 0.0018 P2.5 retina TGTTTTTGTT (5) 1.8 0.0018 P4.5 retina TTCAAAAAAA (25) 31.7 0.0317 P4.5 retina GATATTTTTT (6) 13.9 0.0139 P4.5 retina TGTTTTTGTT (5) 13.9 0.0139 P4.5 retina CGATTTGTAC (3) 5.9 0.0059 P4.5 retina GAAGGGTATT (5) 5.9 0.0059 P4.5 retina GCCATCTTCC (8) 4 0.004 P4.5 retina AAATTTGTTC (3) 2 0.002 P4.5 retina AAGAATCTTT (7) 2 0.002 P4.5 retina GTTGTTAACA (2) 2 0.002 P4.5 retina TCAGTATGTA (2) 2 0.002 P4.5 retina TGCCTTTGCT (4) 2 0.002 P6.5 retina TCAGTATGTA (2) 8.3 0.0083 P6.5 retina TTCAAAAAAA (25) 8.3 0.0083 P6.5 retina GATATTTTTT (6) 5 0.005 P6.5 retina AAATTTGTTC (3) 3.3 0.0033 P6.5 retina CGATTTGTAC (3) 3.3 0.0033 P6.5 retina GAAGGGTATT (5) 3.3 0.0033 P6.5 retina AAGAATCTTT (7) 1.7 0.0017 P6.5 retina GTGGCACATA (5) 1.7 0.0017 P6.5 retina TTCAACCCTC 1.7 0.0017 P6.5 retina TTTATTTATA (6) 1.7 0.0017 P10.5 crx- retina TTCAAAAAAA (25) 5.6 0.0056 P10.5 crx- retina GAAGGGTATT (5) 3.7 0.0037 P10.5 crx- retina GCCATCTTCC (8) 3.7 0.0037 P10.5 crx- retina TCAGTATGTA (2) 3.7 0.0037 P10.5 crx- retina AAATTTGTTC (3) 1.9 0.0019 P10.5 crx- retina CGATTTGTAC (3) 1.9 0.0019 P10.5 crx- retina GTTGTTAACA (2) 1.9 0.0019 P10.5 crx- retina TGTTTTTGTT (5) 1.9 0.0019 P10.5 crx+ retina TTCAAAAAAA (25) 9.6 0.0096 P10.5 crx+ retina GATATTTTTT (6) 5.8 0.0058 P10.5 crx+ retina TCAGTATGTA (2) 5.8 0.0058 P10.5 crx+ retina TGTTTTTGTT (5) 5.8 0.0058 P10.5 crx+ retina GAAGGGTATT (5) 3.8 0.0038 P10.5 crx+ retina GTGGCACATA (5) 3.8 0.0038 P10.5 crx+ retina AAATTTGTTC (3) 1.9 0.0019 P10.5 crx+ retina CGATTTGTAC (3) 1.9 0.0019 P10.5 crx+ retina GCCATCTTCC (8) 1.9 0.0019 Adult retinal GATATTTTTT (6) 9.3 0.0093 Adult retinal TTCAAAAAAA (25) 5.6 0.0056 Adult retinal GAATTTTTTT (5) 3.7 0.0037 Adult retinal GCCATCTTCC (8) 1.9 0.0019 Adult retinal GTGGCACATA (5) 1.9 0.0019 Adult retinal TGTTTTTGTT (5) 1.9 0.0019 Adult retinal TTTCACAAAA (3) 1.9 0.0019 ONL GATATTTTTT (6) 7.7 0.0077 ONL GATACTTTTT (5) 5.7 0.0057 ONL GCCATCTTCC (8) 3.8 0.0038 ONL GTGGCACATA (5) 3.8 0.0038 ONL TTCAAAAAAA (25) 3.8 0.0038 ONL AAATTTGTTC (3) 1.9 0.0019 ONL CGATTTGTAC (3) 1.9 0.0019 ONL GAAGGGTATT (5) 1.9 0.0019 ONL TGTTTGTGTT (11) 1.9 0.0019 ONL TGTTTTTGTT (5) 1.9 0.0019 ONL TTTCACAAAA (3) 1.9 0.0019