Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.143877	Mapre1	microtubule-associated protein, RP/EB family, member 1	2	2 84.0 cM	13589
Gene Ontology	Golgi apparatus | microtubule
Human Homolog	MAPRE1[microtubule-associated protein, RP/EB family, member 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 111 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTCTGTGGAA (3) 14.7 0.0147 P8 Cb GC TGGATGCTGG (15) 13.1 0.0131 P8 Cb GC CTCTTCCCTG (5) 4.9 0.0049 P8 Cb GC GGAAAATTAG (2) 4.9 0.0049 P8 Cb GC CACTACATAA 3.3 0.0033 P8 Cb GC ACAGGAGATT (2) 1.6 0.0016 P8 Cb GC CCCTTGGATG 1.6 0.0016 Cb medulloblastoma CTCTGTGGAA (3) 4.6 0.0046 Cb medulloblastoma TGGATGCTGG (15) 4.6 0.0046 Cb medulloblastoma CCTATAATCC (15) 2.3 0.0023 Cb medulloblastoma GACTACATAA (6) 2.3 0.0023 Cb medulloblastoma GCCCTAGCAG 2.3 0.0023 P8 GC+1d culture CTCTGTGGAA (3) 11.4 0.0114 P8 GC+1d culture TGGATGCTGG (15) 8 0.008 P8 GC+1d culture CACTACATAA 4.6 0.0046 P8 GC+1d culture CTCTTCCCTG (5) 2.3 0.0023 P8 GC+1d culture CCCTTGGATG 1.1 0.0011 P8 GC+1d culture CCTATAATCC (15) 1.1 0.0011 P8 GC+SHH+1d culture CTCTGTGGAA (3) 12.9 0.0129 P8 GC+SHH+1d culture TGGATGCTGG (15) 2.3 0.0023 P8 GC+SHH+1d culture CTCTGTGAAT (8) 1.2 0.0012 P8 GC+SHH+1d culture CTCTTCCCTG (5) 1.2 0.0012 P8 GC+SHH+1d culture GCCCTAGCAG 1.2 0.0012 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 3T3 fibroblasts CACTACATAA 3.5 0.0035 3T3 fibroblasts TGGATGCTGG (15) 3.5 0.0035 E15 cortex CTCTGTGGAA (3) 14.8 0.0148 E15 cortex TGGATGCTGG (15) 14.8 0.0148 E15 cortex CCTATAATCC (15) 4.9 0.0049 E15 cortex CGTCCTTTTT (2) 4.9 0.0049 E15 cortex GCCCTAGCAG 4.9 0.0049 E15 cortex GTCATAGCTG (590) 4.9 0.0049 P1 cortex CTCTGTGGAA (3) 13.6 0.0136 P1 cortex CCTATAATCC (15) 4.5 0.0045 P1 cortex GCCCTAGCAG 4.5 0.0045 Hypothalamus TGGATGCTGG (15) 5.4 0.0054 Hypothalamus CGTCCTTTTT (2) 3.6 0.0036 Hypothalamus CTCTGTGGAA (3) 3.6 0.0036 Hypothalamus CTCTGTGAAT (8) 1.8 0.0018 E12.5 retina CTCTGTGGAA (3) 15 0.015 E12.5 retina TGGATGCTGG (15) 5.6 0.0056 E12.5 retina CACTACATAA 1.9 0.0019 E12.5 retina CTCTTCCCTG (5) 1.9 0.0019 E12.5 retina GACTACATAA (6) 1.9 0.0019 E12.5 retina GCCCTAGCAG 1.9 0.0019 E12.5 retina GGGGCTTACA (9) 1.9 0.0019 E14.5 retina CTCTGTGGAA (3) 27.3 0.0273 E14.5 retina TGGATGCTGG (15) 18.2 0.0182 E14.5 retina CACTACATAA 1.8 0.0018 E14.5 retina GGAAAATTAG (2) 1.8 0.0018 E16.5 retina TGGATGCTGG (15) 30.8 0.0308 E16.5 retina CTCTGTGGAA (3) 21.7 0.0217 E16.5 retina CCTATAATCC (15) 3.6 0.0036 E16.5 retina CTCTTCCCTG (5) 3.6 0.0036 E16.5 retina GGAAAATTAG (2) 3.6 0.0036 E16.5 retina ACAGGAGATT (2) 1.8 0.0018 E16.5 retina CTCTGTGAAT (8) 1.8 0.0018 E18.5 retina CTCTGTGGAA (3) 9.1 0.0091 E18.5 retina CTCTTCCCTG (5) 3.6 0.0036 E18.5 retina CACTACATAA 1.8 0.0018 E18.5 retina GGAAAATTAG (2) 1.8 0.0018 E18.5 retina GGGGCTTACA (9) 1.8 0.0018 E18.5 retina TGGATGCTGG (15) 1.8 0.0018 P0.5 retina CTCTGTGGAA (3) 25.5 0.0255 P0.5 retina TGGATGCTGG (15) 7.9 0.0079 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P0.5 retina ACAGGAGATT (2) 2 0.002 P0.5 retina GACTACATAA (6) 2 0.002 P2.5 retina CTCTGTGGAA (3) 19.4 0.0194 P2.5 retina TGGATGCTGG (15) 15.8 0.0158 P2.5 retina CACTACATAA 5.3 0.0053 P2.5 retina GGAAAATTAG (2) 5.3 0.0053 P2.5 retina GACTACATAG (2) 3.5 0.0035 P2.5 retina GCCCTAGCAG 3.5 0.0035 P2.5 retina CCTATAATCC (15) 1.8 0.0018 P2.5 retina GGGGCTTACA (9) 1.8 0.0018 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P4.5 retina CTCTGTGGAA (3) 25.8 0.0258 P4.5 retina TGGATGCTGG (15) 5.9 0.0059 P4.5 retina GGGGCTTACA (9) 4 0.004 P4.5 retina TTTTTTATGC (3) 4 0.004 P4.5 retina CCTATATCCC (3) 2 0.002 P4.5 retina GTCATAGCTG (590) 2 0.002 P6.5 retina CTCTGTGGAA (3) 16.7 0.0167 P6.5 retina TGGATGCTGG (15) 6.7 0.0067 P6.5 retina GGAAAATTAG (2) 3.3 0.0033 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P6.5 retina ACAGGAGATT (2) 1.7 0.0017 P6.5 retina CCCTTGGATG 1.7 0.0017 P6.5 retina CCTATAATCC (15) 1.7 0.0017 P6.5 retina GACTACATAG (2) 1.7 0.0017 P6.5 retina GGGGCTTACA (9) 1.7 0.0017 P6.5 retina TTTTTTATGC (3) 1.7 0.0017 P10.5 crx- retina CCTATATCCC (3) 5.6 0.0056 P10.5 crx- retina TGGATGCTGG (15) 5.6 0.0056 P10.5 crx- retina GGGGCTTACA (9) 1.9 0.0019 P10.5 crx+ retina CTCTGTGGAA (3) 9.6 0.0096 P10.5 crx+ retina CCTATATCCC (3) 5.8 0.0058 P10.5 crx+ retina TGGATGCTGG (15) 5.8 0.0058 P10.5 crx+ retina GACTACATAA (6) 1.9 0.0019 P10.5 crx+ retina GCCCTAGCAG 1.9 0.0019 Adult retinal TGGATGCTGG (15) 5.6 0.0056 Adult retinal CACTACATAA 1.9 0.0019 Adult retinal CTCTGTGAAT (8) 1.9 0.0019 Adult retinal CTCTGTGGAA (3) 1.9 0.0019 Adult retinal GTCATAGCTG (590) 1.9 0.0019 ONL GTCATAGCTG (590) 5.7 0.0057 ONL CCTATAATCC (15) 3.8 0.0038 ONL CCTATATCCC (3) 3.8 0.0038 ONL GACTACATAG (2) 1.9 0.0019 ONL GGGGCTTACA (9) 1.9 0.0019