Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.1440	Tac1	tachykinin 1	6	6 A1 (6 5.0 cM)	21333
Gene Ontology	extracellular | extracellular space | intracellular | neuropeptide signaling pathway | perception of pain | receptor binding | response to pain | synaptic transmission | tachykinin signaling pathway
Human Homolog	TAC1[tachykinin, precursor 1 (substance K, substance P, neurokinin 1, neurokinin 2, neuromedin L, neurokinin alpha, neuropeptide K, neuropeptide gamma)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 7 In Situ Hybridization Images

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SAGE Tags

Total 39 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTTTTGAACA (4) 13.1 0.0131 Cb medulloblastoma TTTTTGAACA (4) 11.6 0.0116 Cb medulloblastoma AAAGCAAAAC (6) 2.3 0.0023 P8 GC+1d culture TTTTTGAACA (4) 18.3 0.0183 P8 GC+SHH+1d culture TTTTTGAACA (4) 14.1 0.0141 P8 GC+SHH+1d culture TTTCCTGTTT (3) 1.2 0.0012 3T3 fibroblasts TTTTTGAACA (4) 3.5 0.0035 E15 cortex AAAGCAAAAC (6) 4.9 0.0049 P1 cortex TTTTTGAACA (4) 9.1 0.0091 Hypothalamus TTTTTGAACA (4) 12.7 0.0127 Hypothalamus TTGTTGTGAG 3.6 0.0036 Hypothalamus AAAGCAGAAC (5) 1.8 0.0018 Hypothalamus TTTCCTGTTT (3) 1.8 0.0018 E12.5 retina TTTTTGAACA (4) 26.3 0.0263 E14.5 retina TTTTTGAACA (4) 21.9 0.0219 E14.5 retina AAAGCAGAAC (5) 1.8 0.0018 E14.5 retina TTTCCTGTTT (3) 1.8 0.0018 E16.5 retina TTTTTGAACA (4) 9.1 0.0091 E16.5 retina TTTCCTGTTT (3) 1.8 0.0018 E18.5 retina TTTTTGAACA (4) 14.6 0.0146 P0.5 retina TTTTTGAACA (4) 23.6 0.0236 P0.5 retina TTTCCTGTTT (3) 2 0.002 P2.5 retina TTTTTGAACA (4) 19.4 0.0194 P4.5 retina TTTTTGAACA (4) 7.9 0.0079 P4.5 retina AAAGCAAAAC (6) 2 0.002 P4.5 retina TTGTTGTGAG 2 0.002 P4.5 retina TTTCCTGTTT (3) 2 0.002 P6.5 retina TTTTTGAACA (4) 11.7 0.0117 P6.5 retina TTTCCTGTTT (3) 1.7 0.0017 P10.5 crx- retina TTTTTGAACA (4) 16.7 0.0167 P10.5 crx- retina TTTCCTGTTT (3) 13 0.013 P10.5 crx+ retina TTTTTGAACA (4) 9.6 0.0096 P10.5 crx+ retina TTTCCTGTTT (3) 1.9 0.0019 Adult retinal TTTCCTGTTT (3) 5.6 0.0056 Adult retinal TTTTTGAACA (4) 5.6 0.0056 Adult retinal AAAGCAGAAC (5) 3.7 0.0037 ONL TTTCCTGTTT (3) 3.8 0.0038 ONL TTTTTGAACA (4) 3.8 0.0038 ONL AAAGCAGAAC (5) 1.9 0.0019