Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.1451	Mfge8	milk fat globule-EGF factor 8 protein	7	7 41.2 cM	17304
Gene Ontology	cell adhesion | external side of plasma membrane | extracellular space | extracellular space | extrinsic to plasma membrane | fertilization (sensu Animalia) | integrin binding | phagocytosis, binding | phagocytosis, engulfment | phosphatidylethanolamine binding | phosphatidylserine binding | positive regulation of phagocytosis | protein binding
Human Homolog	AGC1[aggrecan 1 (chondroitin sulfate proteoglycan 1, large aggregating proteoglycan, antigen identified by monoclonal antibody A0122)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 205 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TAATTTACCT (2) 11.4 0.0114 P8 Cb GC GAAGGGCCAG (10) 3.3 0.0033 P8 Cb GC GAAGAAAGAA (5) 1.6 0.0016 P8 Cb GC GAAGGTGCCT (2) 1.6 0.0016 P8 Cb GC GCAACGAAAA (3) 1.6 0.0016 P8 Cb GC GGGAAGGCTG (4) 1.6 0.0016 P8 Cb GC GTCAACCCCA (5) 1.6 0.0016 P8 Cb GC GTGCAGTTTG (6) 1.6 0.0016 Cb medulloblastoma AAAAAAAAGA (7) 6.9 0.0069 Cb medulloblastoma GGGGGGGGGG (112) 6.9 0.0069 Cb medulloblastoma GCAACGAAAA (3) 2.3 0.0023 Cb medulloblastoma GGGCTAGAGA 2.3 0.0023 Cb medulloblastoma GGGCTGCAGC (5) 2.3 0.0023 Cb medulloblastoma TAATTTACCT (2) 2.3 0.0023 Cb medulloblastoma TGCATCCTGT (2) 2.3 0.0023 P8 GC+1d culture TAATTTACCT (2) 10.3 0.0103 P8 GC+1d culture TTCCATTCCG 5.7 0.0057 P8 GC+1d culture GAAGAGGGGG (4) 3.4 0.0034 P8 GC+1d culture AAAAAAAAGA (7) 2.3 0.0023 P8 GC+1d culture GAAGAAAGAA (5) 2.3 0.0023 P8 GC+1d culture GGGGGGGGGG (112) 2.3 0.0023 P8 GC+1d culture AAGGTTCACA (2) 1.1 0.0011 P8 GC+1d culture AGAGAGAAGG (3) 1.1 0.0011 P8 GC+1d culture GAAGGGCCAG (10) 1.1 0.0011 P8 GC+1d culture GAGGAATGTG (5) 1.1 0.0011 P8 GC+1d culture GCTCGCTCGT (2) 1.1 0.0011 P8 GC+1d culture GGGCTAGAGA 1.1 0.0011 P8 GC+1d culture GTGCAGTTTG (6) 1.1 0.0011 P8 GC+SHH+1d culture TAATTTACCT (2) 10.5 0.0105 P8 GC+SHH+1d culture GGGGGGGGGG (112) 7 0.007 P8 GC+SHH+1d culture GAAGAAAGAA (5) 3.5 0.0035 P8 GC+SHH+1d culture GAAGGGCCAG (10) 2.3 0.0023 P8 GC+SHH+1d culture GAAGGTGCCT (2) 2.3 0.0023 P8 GC+SHH+1d culture GCTCGCTCGT (2) 2.3 0.0023 P8 GC+SHH+1d culture TTCCATTCCG 2.3 0.0023 P8 GC+SHH+1d culture AAAAAAAAGA (7) 1.2 0.0012 P8 GC+SHH+1d culture AGCAGGAGCA (3) 1.2 0.0012 P8 GC+SHH+1d culture GAAGAGGGGG (4) 1.2 0.0012 P8 GC+SHH+1d culture GCAACGAAAA (3) 1.2 0.0012 P8 GC+SHH+1d culture GCGCACCCCC (2) 1.2 0.0012 P8 GC+SHH+1d culture GGCCTTGCAG (3) 1.2 0.0012 P8 GC+SHH+1d culture GGGCTGCAGC (5) 1.2 0.0012 P8 GC+SHH+1d culture GGGGGTGGGA (5) 1.2 0.0012 P8 GC+SHH+1d culture GTGCAGTTTG (6) 1.2 0.0012 3T3 fibroblasts TTCCATTCCG 17.5 0.0175 3T3 fibroblasts GAAGGGCCAG (10) 3.5 0.0035 3T3 fibroblasts GCGCACCCCC (2) 3.5 0.0035 3T3 fibroblasts GCTCCCCCAA (5) 3.5 0.0035 3T3 fibroblasts GCTGGGGGCT (5) 3.5 0.0035 3T3 fibroblasts GGGGGGGGGG (112) 3.5 0.0035 E15 cortex GAAGGGCCAG (10) 14.8 0.0148 E15 cortex GGGGGGGGGG (112) 4.9 0.0049 E15 cortex TTCCATTCCG 4.9 0.0049 P1 cortex GAAGGTGCCT (2) 4.5 0.0045 P1 cortex GGGGGTGGGA (5) 4.5 0.0045 P1 cortex TACCAGAACA (2) 4.5 0.0045 P1 cortex TTCCATTCCG 4.5 0.0045 Hypothalamus TTCCATTCCG 7.2 0.0072 Hypothalamus TAATTTACCT (2) 3.6 0.0036 Hypothalamus ACAGCCAGCA (2) 1.8 0.0018 Hypothalamus GCTGGGGGCT (5) 1.8 0.0018 Hypothalamus GGACAGAACA (5) 1.8 0.0018 Hypothalamus GGGCTGCAGC (5) 1.8 0.0018 Hypothalamus GGGGGGGGGG (112) 1.8 0.0018 Hypothalamus GGGGGTGGGA (5) 1.8 0.0018 Hypothalamus GTCAACCCCA (5) 1.8 0.0018 Hypothalamus GTGCAGTTTG (6) 1.8 0.0018 Hypothalamus TGGGGGCTGG (3) 1.8 0.0018 E12.5 retina GAAGGGCCAG (10) 3.8 0.0038 E12.5 retina GTCAACCCCA (5) 3.8 0.0038 E12.5 retina TAATTTACCT (2) 3.8 0.0038 E12.5 retina TTCCATTCCG 3.8 0.0038 E12.5 retina AAAAAAAAGA (7) 1.9 0.0019 E12.5 retina AAGGTTCACA (2) 1.9 0.0019 E12.5 retina AGCAGGAGCA (3) 1.9 0.0019 E12.5 retina GAAGGTGCCT (2) 1.9 0.0019 E12.5 retina GAGGAATGTG (5) 1.9 0.0019 E12.5 retina GGCCTTGCAG (3) 1.9 0.0019 E12.5 retina GGGGGTGGGA (5) 1.9 0.0019 E12.5 retina TGGGGGCTGG (3) 1.9 0.0019 E14.5 retina GAAGGGCCAG (10) 5.5 0.0055 E14.5 retina AAAAAAAAGA (7) 3.6 0.0036 E14.5 retina AAGGTTCACA (2) 1.8 0.0018 E14.5 retina AGCAGGAGCA (3) 1.8 0.0018 E14.5 retina GAGGACACAA (4) 1.8 0.0018 E14.5 retina GCGCACCCCC (2) 1.8 0.0018 E14.5 retina GCTGCCAGAC (2) 1.8 0.0018 E14.5 retina GTCAACCCCA (5) 1.8 0.0018 E16.5 retina TTCCATTCCG 5.4 0.0054 E16.5 retina AAGGTTCACA (2) 3.6 0.0036 E16.5 retina GTCAACCCCA (5) 3.6 0.0036 E16.5 retina AGCAGGAGCA (3) 1.8 0.0018 E16.5 retina GAGGAATGTG (5) 1.8 0.0018 E16.5 retina GCTCCCCCAA (5) 1.8 0.0018 E16.5 retina GCTGCCAGAC (2) 1.8 0.0018 E16.5 retina TAATTTACCT (2) 1.8 0.0018 E18.5 retina TAATTTACCT (2) 5.5 0.0055 E18.5 retina GAAGAAAGAA (5) 3.6 0.0036 E18.5 retina AAGGTTCACA (2) 1.8 0.0018 E18.5 retina GAAGGGCCAG (10) 1.8 0.0018 E18.5 retina GGGGGTGGGA (5) 1.8 0.0018 E18.5 retina TGCATCCTGT (2) 1.8 0.0018 E18.5 retina TTCCATTCCG 1.8 0.0018 P0.5 retina TTCCATTCCG 9.8 0.0098 P0.5 retina AAAAAAAAGA (7) 3.9 0.0039 P0.5 retina GAAGGGCCAG (10) 3.9 0.0039 P0.5 retina GAAGGTGCCT (2) 3.9 0.0039 P0.5 retina TAATTTACCT (2) 3.9 0.0039 P0.5 retina AAGGTTCACA (2) 2 0.002 P0.5 retina GAAGAAAGAA (5) 2 0.002 P0.5 retina GGCCTTGCAG (3) 2 0.002 P0.5 retina GTCACAGTCA 2 0.002 P0.5 retina TGCATCCTGT (2) 2 0.002 P2.5 retina GGGGGGGGGG (112) 7 0.007 P2.5 retina GAAGGGCCAG (10) 5.3 0.0053 P2.5 retina AAAAAAAAGA (7) 3.5 0.0035 P2.5 retina AAGGTTCACA (2) 3.5 0.0035 P2.5 retina CCAAGCTTAT (2) 3.5 0.0035 P2.5 retina GAAGGTGCCT (2) 3.5 0.0035 P2.5 retina GAGGACACAA (4) 3.5 0.0035 P2.5 retina TAATTTACCT (2) 3.5 0.0035 P2.5 retina AGCAGGAGCA (3) 1.8 0.0018 P2.5 retina GAGGAATGTG (5) 1.8 0.0018 P2.5 retina GCTCCCCCAA (5) 1.8 0.0018 P2.5 retina GGGGGTGGGA (5) 1.8 0.0018 P2.5 retina GTCAACCCCA (5) 1.8 0.0018 P2.5 retina GTGCAGTTTG (6) 1.8 0.0018 P2.5 retina TGCATCCTGT (2) 1.8 0.0018 P4.5 retina GGGGGGGGGG (112) 9.9 0.0099 P4.5 retina TAATTTACCT (2) 7.9 0.0079 P4.5 retina GAAGGGCCAG (10) 4 0.004 P4.5 retina GAGGAGGCAA (2) 4 0.004 P4.5 retina GAAGGTGCCT (2) 2 0.002 P4.5 retina GCTCCCCCAA (5) 2 0.002 P4.5 retina GGGCTGCAGC (5) 2 0.002 P4.5 retina GGGGGTGGGA (5) 2 0.002 P4.5 retina TACCAGAACA (2) 2 0.002 P4.5 retina TGCATCCTGT (2) 2 0.002 P4.5 retina TGGGGGCTGG (3) 2 0.002 P4.5 retina TTCACCACAA (6) 2 0.002 P6.5 retina TTCCATTCCG 15 0.015 P6.5 retina GGGGGTGGGA (5) 6.7 0.0067 P6.5 retina AAGGTTCACA (2) 3.3 0.0033 P6.5 retina AGAGAGAAGG (3) 3.3 0.0033 P6.5 retina GGGGGGGGGG (112) 3.3 0.0033 P6.5 retina GTCACAGTCA 3.3 0.0033 P6.5 retina GTGCAGTTTG (6) 3.3 0.0033 P6.5 retina TAATTTACCT (2) 3.3 0.0033 P6.5 retina AAAAAAAAGA (7) 1.7 0.0017 P6.5 retina ACAGCCAGCA (2) 1.7 0.0017 P6.5 retina CCAAGCTTAT (2) 1.7 0.0017 P6.5 retina GAAGAAAGAA (5) 1.7 0.0017 P6.5 retina GAAGGGCCAG (10) 1.7 0.0017 P6.5 retina GAAGGTGCCT (2) 1.7 0.0017 P6.5 retina GAGGAGGCAA (2) 1.7 0.0017 P6.5 retina TACCAGAACA (2) 1.7 0.0017 P10.5 crx- retina GTCAACCCCA (5) 7.4 0.0074 P10.5 crx- retina TAATTTACCT (2) 5.6 0.0056 P10.5 crx- retina TTCCATTCCG 5.6 0.0056 P10.5 crx- retina GAAGAAAGAA (5) 3.7 0.0037 P10.5 crx- retina GAGGAATGTG (5) 3.7 0.0037 P10.5 crx- retina AAAAAAAAGA (7) 1.9 0.0019 P10.5 crx- retina AAGGTTCACA (2) 1.9 0.0019 P10.5 crx- retina GAAGGTGCCT (2) 1.9 0.0019 P10.5 crx- retina GTGCAGTTTG (6) 1.9 0.0019 P10.5 crx+ retina GGGGGGGGGG (112) 9.6 0.0096 P10.5 crx+ retina TTCCATTCCG 5.8 0.0058 P10.5 crx+ retina AGCAGGAGCA (3) 3.8 0.0038 P10.5 crx+ retina TAATTTACCT (2) 3.8 0.0038 P10.5 crx+ retina TGCATCCTGT (2) 3.8 0.0038 P10.5 crx+ retina AAAAAAAAGA (7) 1.9 0.0019 P10.5 crx+ retina AAGGTTCACA (2) 1.9 0.0019 P10.5 crx+ retina CCAAGCTTAT (2) 1.9 0.0019 P10.5 crx+ retina GAAGAGGGGG (4) 1.9 0.0019 P10.5 crx+ retina GAGGACACAA (4) 1.9 0.0019 P10.5 crx+ retina GCAACGAAAA (3) 1.9 0.0019 P10.5 crx+ retina GCGCACCCCC (2) 1.9 0.0019 P10.5 crx+ retina GCTGCCAGAC (2) 1.9 0.0019 P10.5 crx+ retina GGGCTGCAGC (5) 1.9 0.0019 P10.5 crx+ retina TTCACCACAA (6) 1.9 0.0019 Adult retinal TTCCATTCCG 22.2 0.0222 Adult retinal CCAAGCTTAT (2) 3.7 0.0037 Adult retinal GAAGGTGCCT (2) 3.7 0.0037 Adult retinal GGGGGGGGGG (112) 3.7 0.0037 Adult retinal AAGGTTCACA (2) 1.9 0.0019 Adult retinal ACAGCCAGCA (2) 1.9 0.0019 Adult retinal GAAGAAAGAA (5) 1.9 0.0019 Adult retinal GCGCACCCCC (2) 1.9 0.0019 Adult retinal GGACAGAACA (5) 1.9 0.0019 Adult retinal GGGAAGGCTG (4) 1.9 0.0019 Adult retinal GGGCTAGAGA 1.9 0.0019 Adult retinal TTCACCACAA (6) 1.9 0.0019 ONL CCAAGCTTAT (2) 15.3 0.0153 ONL TTCCATTCCG 13.4 0.0134 ONL AAGGTTCACA (2) 3.8 0.0038 ONL GAAGAAAGAA (5) 3.8 0.0038 ONL TAATTTACCT (2) 3.8 0.0038 ONL AGCAGGAGCA (3) 1.9 0.0019 ONL GAGGAATGTG (5) 1.9 0.0019 ONL GGGAAGGCTG (4) 1.9 0.0019 ONL GGGCTAGAGA 1.9 0.0019 ONL GGGGGGGGGG (112) 1.9 0.0019 ONL GGGGGTGGGA (5) 1.9 0.0019 ONL GTCACAGTCA 1.9 0.0019 ONL TGCATCCTGT (2) 1.9 0.0019