Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.14547	Cbx2	chromobox homolog 2 (Drosophila Pc class)	11	11 E2 (11 75.0 cM)	12416
Gene Ontology	chromatin | chromatin assembly/disassembly | chromatin binding | chromatin modification | DNA binding | nucleus | protein binding | regulation of transcription, DNA-dependent
Human Homolog	MGC10561[hypothetical protein MGC10561]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 64 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGAAGGAGGT (5) 16.3 0.0163 P8 Cb GC AAGCTGTTTG (4) 1.6 0.0016 P8 Cb GC GAGGAGCTGA (8) 1.6 0.0016 P8 Cb GC TGTGTAGTGC 1.6 0.0016 Cb medulloblastoma AAGCTGTTTG (4) 2.3 0.0023 P8 GC+1d culture AGAAGGAGGT (5) 82.2 0.0822 P8 GC+1d culture TGTGTAGTGC 2.3 0.0023 P8 GC+1d culture GAGGAGCTGA (8) 1.1 0.0011 P8 GC+SHH+1d culture AGAAGGAGGT (5) 51.5 0.0515 P8 GC+SHH+1d culture TGTGTAGTGC 3.5 0.0035 P8 GC+SHH+1d culture AAGCTGTTTG (4) 2.3 0.0023 P8 GC+SHH+1d culture AAGGGAAAAT (4) 1.2 0.0012 P8 GC+SHH+1d culture GAGGAGCTGA (8) 1.2 0.0012 3T3 fibroblasts AGAAGGAGGT (5) 14 0.014 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 E15 cortex AGAAGGAGGT (5) 143.5 0.1435 E15 cortex GAGGAGCTGA (8) 9.9 0.0099 E15 cortex AAGCTGTTTG (4) 4.9 0.0049 E15 cortex GTCATAGCTG (590) 4.9 0.0049 P1 cortex AGAAGGAGGT (5) 168.2 0.1682 Hypothalamus AGAAGGAGGT (5) 19.9 0.0199 E12.5 retina AGAAGGAGGT (5) 22.5 0.0225 E12.5 retina TGTGTAGTGC 9.4 0.0094 E12.5 retina AAGCTGTTTG (4) 3.8 0.0038 E12.5 retina GAGGAGCTGA (8) 1.9 0.0019 E14.5 retina AGAAGGAGGT (5) 10.9 0.0109 E14.5 retina TGTGTAGTGC 5.5 0.0055 E14.5 retina AAGCTGTTTG (4) 1.8 0.0018 E14.5 retina GGACCCCAAA 1.8 0.0018 E16.5 retina AGAAGGAGGT (5) 16.3 0.0163 E16.5 retina TGTGTAGTGC 9.1 0.0091 E16.5 retina AAGCTGTTTG (4) 1.8 0.0018 E16.5 retina AAGGGAAAAT (4) 1.8 0.0018 E16.5 retina GGACCCCAAA 1.8 0.0018 E18.5 retina AGAAGGAGGT (5) 34.6 0.0346 E18.5 retina TGTGTAGTGC 7.3 0.0073 E18.5 retina AAGCTGTTTG (4) 1.8 0.0018 E18.5 retina GAGGAGCTGA (8) 1.8 0.0018 P0.5 retina AGAAGGAGGT (5) 115.8 0.1158 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P0.5 retina TGTGTAGTGC 3.9 0.0039 P0.5 retina AAGCTGTTTG (4) 2 0.002 P0.5 retina GGACCCCAAA 2 0.002 P2.5 retina AGAAGGAGGT (5) 28.2 0.0282 P2.5 retina TGTGTAGTGC 3.5 0.0035 P2.5 retina GAGGAGCTGA (8) 1.8 0.0018 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P4.5 retina AGAAGGAGGT (5) 13.9 0.0139 P4.5 retina GAGGAGCTGA (8) 2 0.002 P4.5 retina GTCATAGCTG (590) 2 0.002 P6.5 retina AGAAGGAGGT (5) 21.7 0.0217 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P6.5 retina TGTGTAGTGC 3.3 0.0033 P6.5 retina AAGGGAAAAT (4) 1.7 0.0017 P10.5 crx- retina AGAAGGAGGT (5) 9.3 0.0093 P10.5 crx+ retina AGAAGGAGGT (5) 7.7 0.0077 P10.5 crx+ retina GAGGAGCTGA (8) 1.9 0.0019 Adult retinal AAGCTGTTTG (4) 3.7 0.0037 Adult retinal AGAAGGAGGT (5) 3.7 0.0037 Adult retinal GAGGAGCTGA (8) 1.9 0.0019 Adult retinal GTCATAGCTG (590) 1.9 0.0019 ONL GTCATAGCTG (590) 5.7 0.0057 ONL AGAAGGAGGT (5) 1.9 0.0019 ONL GAGGAGCTGA (8) 1.9 0.0019