Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.14663
Atp5l
ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g
9
27425
Mm.14663
4933437C06Rik
RIKEN cDNA 4933437C06 gene
9
71222
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 83 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGTAACAGGA
(
4
)
65.3
0.0653
P8 Cb GC
ACTGCTCTCT (
5
)
3.3
0.0033
P8 Cb GC
CTGATCTCCA (
5
)
1.6
0.0016
P8 Cb GC
GGAGCCTCTC (
2
)
1.6
0.0016
Cb medulloblastoma
TGTAACAGGA
(
4
)
87.9
0.0879
Cb medulloblastoma
ACTGCTCTCT (
5
)
2.3
0.0023
Cb medulloblastoma
GACACTGGCA
(
7
)
2.3
0.0023
Cb medulloblastoma
GCCAAGTTCA
(
2
)
2.3
0.0023
Cb medulloblastoma
GTCCAAGAAC
(
5
)
2.3
0.0023
Cb medulloblastoma
GTTGGCTATG (
5
)
2.3
0.0023
Cb medulloblastoma
TGGCCCCACC (
4
)
2.3
0.0023
Cb medulloblastoma
TGTAACAAGA
(
3
)
2.3
0.0023
P8 GC+1d culture
TGTAACAGGA
(
4
)
75.3
0.0753
P8 GC+1d culture
GTCCAAGAAC
(
5
)
2.3
0.0023
P8 GC+1d culture
ACTGCTCTCT (
5
)
1.1
0.0011
P8 GC+1d culture
TGTAACGGGA
(
2
)
1.1
0.0011
P8 GC+SHH+1d culture
TGTAACAGGA
(
4
)
80.8
0.0808
P8 GC+SHH+1d culture
GGAGCCTCTC (
2
)
1.2
0.0012
P8 GC+SHH+1d culture
TGTAACGGGA
(
2
)
1.2
0.0012
3T3 fibroblasts
TGTAACAGGA
(
4
)
28
0.028
3T3 fibroblasts
GTTGGCTATG (
5
)
3.5
0.0035
E15 cortex
TGTAACAGGA
(
4
)
29.7
0.0297
E15 cortex
GCCAAGTTCA
(
2
)
4.9
0.0049
E15 cortex
TGTAACAAGA
(
3
)
4.9
0.0049
P1 cortex
TGTAACAGGA
(
4
)
36.4
0.0364
Hypothalamus
TGTAACAGGA
(
4
)
168.4
0.1684
Hypothalamus
GTCCAAGAAC
(
5
)
9.1
0.0091
Hypothalamus
ACTGCTCTCT (
5
)
5.4
0.0054
Hypothalamus
GCCAAGTTCA
(
2
)
1.8
0.0018
E12.5 retina
TGTAACAGGA
(
4
)
63.8
0.0638
E12.5 retina
AATAAATATT (
4
)
1.9
0.0019
E12.5 retina
CTGATCTCCA (
5
)
1.9
0.0019
E12.5 retina
GGAGCCTCTC (
2
)
1.9
0.0019
E14.5 retina
TGTAACAGGA
(
4
)
80.2
0.0802
E14.5 retina
AATAAATATT (
4
)
1.8
0.0018
E14.5 retina
CTGATCTCCA (
5
)
1.8
0.0018
E14.5 retina
GCCAAGTTCA
(
2
)
1.8
0.0018
E14.5 retina
GTCCAAGAAC
(
5
)
1.8
0.0018
E14.5 retina
TGTAACAAGA
(
3
)
1.8
0.0018
E16.5 retina
TGTAACAGGA
(
4
)
68.8
0.0688
E16.5 retina
GTCCAAGAAC
(
5
)
3.6
0.0036
E16.5 retina
ACTGCTCTCT (
5
)
1.8
0.0018
E16.5 retina
GTTGGCTATG (
5
)
1.8
0.0018
E16.5 retina
TGTAACGGGA
(
2
)
1.8
0.0018
E18.5 retina
TGTAACAGGA
(
4
)
120.1
0.1201
E18.5 retina
AATAAATATT (
4
)
1.8
0.0018
E18.5 retina
GCCAAGTTCA
(
2
)
1.8
0.0018
E18.5 retina
TGGCCCCACC (
4
)
1.8
0.0018
P0.5 retina
TGTAACAGGA
(
4
)
49.1
0.0491
P0.5 retina
TGTGACAGGA
(
2
)
3.9
0.0039
P0.5 retina
TGTAACAAGA
(
3
)
2
0.002
P0.5 retina
TGTAACGGGA
(
2
)
2
0.002
P2.5 retina
TGTAACAGGA
(
4
)
98.5
0.0985
P2.5 retina
GTCCAAGAAC
(
5
)
3.5
0.0035
P2.5 retina
GTTGGCTATG (
5
)
1.8
0.0018
P2.5 retina
TGTAACGGGA
(
2
)
1.8
0.0018
P4.5 retina
TGTAACAGGA
(
4
)
116.9
0.1169
P4.5 retina
AATAAATATT (
4
)
2
0.002
P4.5 retina
GACACTGGCA
(
7
)
2
0.002
P4.5 retina
GTTGGCTATG (
5
)
2
0.002
P6.5 retina
TGTAACAGGA
(
4
)
88.4
0.0884
P6.5 retina
GTTGGCTATG (
5
)
3.3
0.0033
P10.5 crx- retina
TGTAACAGGA
(
4
)
128.2
0.1282
P10.5 crx- retina
GTCCAAGAAC
(
5
)
7.4
0.0074
P10.5 crx- retina
ACTGCTCTCT (
5
)
1.9
0.0019
P10.5 crx- retina
GCCAAGTTCA
(
2
)
1.9
0.0019
P10.5 crx- retina
GGAGCCTCTC (
2
)
1.9
0.0019
P10.5 crx- retina
TGGCCCCACC (
4
)
1.9
0.0019
P10.5 crx- retina
TGTAACGGGA
(
2
)
1.9
0.0019
P10.5 crx+ retina
TGTAACAGGA
(
4
)
148
0.148
P10.5 crx+ retina
GTCCAAGAAC
(
5
)
3.8
0.0038
P10.5 crx+ retina
TGTGACAGGA
(
2
)
3.8
0.0038
P10.5 crx+ retina
ACTGCTCTCT (
5
)
1.9
0.0019
P10.5 crx+ retina
GACACTGGCA
(
7
)
1.9
0.0019
P10.5 crx+ retina
TGTAACAAGA
(
3
)
1.9
0.0019
Adult retinal
TGTAACAGGA
(
4
)
61.1
0.0611
Adult retinal
AATAAATATT (
4
)
1.9
0.0019
Adult retinal
CTGATCTCCA (
5
)
1.9
0.0019
Adult retinal
GTTGGCTATG (
5
)
1.9
0.0019
ONL
TGTAACAGGA
(
4
)
47.9
0.0479
ONL
CTGATCTCCA (
5
)
1.9
0.0019
ONL
GACACTGGCA
(
7
)
1.9
0.0019
ONL
TGGCCCCACC (
4
)
1.9
0.0019
