Mouse Retina SAGE Library    [Home]    [Libraries]    [Images]
Gene:              Accession:    
e.g., Rho or Rhodopsin e.g., BG297543 batch search
Tag:        Cytoband (Mm):    
e.g., CCCAGTTCAC e.g., 6 E3
Unigene:        Cytoband (Hs):    
e.g., Mm.2965 batch search e.g., 3q21-q24

 UniGene  Symbol  Name  Chr  Cytoband  LocusLink 
 Mm.146855 Shank3SH3/ankyrin domain gene 3 15    58234 
 Gene Ontology DNA binding | intracellular signaling cascade | regulation of transcription, DNA-dependent | transcription factor activity
 Human Homolog SHANK3[SH3 and multiple ankyrin repeat domains 3]
 Clusters 
   Neighbors    

No In Situ Hybridization images could be found.



SAGE Tags

Total 25 tags found with positive counts.

  all tags    reliable tags    sum by library with all tags    sum by library with reliable tags  
 Library  Tag (Other Genes)  Normalized Count  % in library 
P8 Cb GCGAGCGCAGTG (5)3.30.0033
Cb medulloblastomaGAGCGCAGTG (5)4.60.0046
P8 GC+1d cultureGAGCGCAGTG (5)80.008
P8 GC+1d cultureGCCCAGGGGC (4)4.60.0046
P8 GC+SHH+1d cultureGAGCGCAGTG (5)10.50.0105
P8 GC+SHH+1d cultureGCCCAGGGGC (4)1.20.0012
3T3 fibroblastsGAGCGCAGTG (5)10.50.0105
P1 cortexGAGCGCAGTG (5)9.10.0091
HypothalamusGAGCGCAGTG (5)3.60.0036
HypothalamusGCCCAGGGGC (4)3.60.0036
E12.5 retinaGAGCGCAGTG (5)150.015
E14.5 retinaGAGCGCAGTG (5)9.10.0091
E16.5 retinaGAGCGCAGTG (5)7.20.0072
E18.5 retinaGAGCGCAGTG (5)5.50.0055
E18.5 retinaGCCCAGGGGC (4)1.80.0018
P0.5 retinaGAGCGCAGTG (5)11.80.0118
P2.5 retinaGAGCGCAGTG (5)14.10.0141
P4.5 retinaGAGCGCAGTG (5)9.90.0099
P4.5 retinaGCCCAGGGGC (4)20.002
P6.5 retinaGAGCGCAGTG (5)50.005
P10.5 crx- retinaGAGCGCAGTG (5)20.40.0204
P10.5 crx- retinaGCCCAGGGGC (4)1.90.0019
P10.5 crx+ retinaGAGCGCAGTG (5)5.80.0058
Adult retinalGAGCGCAGTG (5)5.60.0056
ONLGAGCGCAGTG (5)11.50.0115