Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.147946	Mybbp1a	MYB binding protein (P160) 1a	11	11 40.0 cM	18432
Gene Ontology	electron transport | negative regulation of transcription | protein binding | transcriptional repressor activity
Human Homolog	MYBBP1A[MYB binding protein (P160) 1a]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 109 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTCACACCAC (2) 50.6 0.0506 P8 Cb GC ATGCTAAAAA 4.9 0.0049 P8 Cb GC AGGATGCTAG (2) 1.6 0.0016 P8 Cb GC GATTGTTTAT 1.6 0.0016 P8 Cb GC GCGGAGATGA (2) 1.6 0.0016 Cb medulloblastoma ATGCTAAAAA 2.3 0.0023 Cb medulloblastoma ATGCTATATG (2) 2.3 0.0023 Cb medulloblastoma CTGGAGGTGA 2.3 0.0023 Cb medulloblastoma GTCACACCAC (2) 2.3 0.0023 P8 GC+1d culture GTCACACCAC (2) 17.1 0.0171 P8 GC+1d culture AATGGCCCTT (2) 8 0.008 P8 GC+1d culture ATGCTAAAAA 1.1 0.0011 P8 GC+1d culture ATGCTATATG (2) 1.1 0.0011 P8 GC+1d culture CTGCAGCTGC (5) 1.1 0.0011 P8 GC+SHH+1d culture GTCACACCAC (2) 23.4 0.0234 P8 GC+SHH+1d culture AATGGCCCTT (2) 5.9 0.0059 P8 GC+SHH+1d culture ATGCTAAAAA 5.9 0.0059 P8 GC+SHH+1d culture CCTGCTCTGA (4) 2.3 0.0023 P8 GC+SHH+1d culture ATGCTATATG (2) 1.2 0.0012 P8 GC+SHH+1d culture CCTGCTGCCA 1.2 0.0012 P8 GC+SHH+1d culture CTGGAGGTGA 1.2 0.0012 3T3 fibroblasts CCTGCTGCCA 21 0.021 3T3 fibroblasts GTCACACCAC (2) 21 0.021 3T3 fibroblasts CCTGCTCTGA (4) 3.5 0.0035 3T3 fibroblasts GCGGAGATGA (2) 3.5 0.0035 E15 cortex GTCACACCAC (2) 14.8 0.0148 E15 cortex CCTGCTGCCA 9.9 0.0099 E15 cortex ATGCTAAAAA 4.9 0.0049 E15 cortex CACTGGCCCT 4.9 0.0049 P1 cortex GTCACACCAC (2) 50 0.05 P1 cortex ATGCTAAAAA 9.1 0.0091 P1 cortex AATGGCCCTT (2) 4.5 0.0045 P1 cortex CACTGGCCCT 4.5 0.0045 Hypothalamus ATGCTAAAAA 9.1 0.0091 Hypothalamus CTGCAGCTGC (5) 1.8 0.0018 Hypothalamus GGTTGGGGGG (2) 1.8 0.0018 E12.5 retina GTCACACCAC (2) 50.7 0.0507 E12.5 retina ATGCTAAAAA 13.1 0.0131 E12.5 retina CTGCAGCTGC (5) 7.5 0.0075 E12.5 retina CCTGCTCTGA (4) 5.6 0.0056 E12.5 retina AATGGCCCTT (2) 3.8 0.0038 E12.5 retina CAGCTGTGAG (2) 1.9 0.0019 E12.5 retina CCTGCTGCCA 1.9 0.0019 E12.5 retina GCGGAGATGA (2) 1.9 0.0019 E14.5 retina ATGCTAAAAA 12.8 0.0128 E14.5 retina GTCACACCAC (2) 5.5 0.0055 E14.5 retina ATGCTATATG (2) 1.8 0.0018 E14.5 retina CTGCAGCTGC (5) 1.8 0.0018 E14.5 retina GATTGTTTAT 1.8 0.0018 E14.5 retina TCACCACCAC 1.8 0.0018 E16.5 retina ATGCTAAAAA 9.1 0.0091 E16.5 retina GTCACACCAC (2) 5.4 0.0054 E16.5 retina AGGATGCTAG (2) 1.8 0.0018 E16.5 retina ATGCTATATG (2) 1.8 0.0018 E16.5 retina CAGCTGTGAG (2) 1.8 0.0018 E16.5 retina CCTGCTCTGA (4) 1.8 0.0018 E16.5 retina CCTGCTGCCA 1.8 0.0018 E18.5 retina GTCACACCAC (2) 25.5 0.0255 E18.5 retina ATGCTAAAAA 10.9 0.0109 E18.5 retina TTAAACAAAA (5) 5.5 0.0055 P0.5 retina GTCACACCAC (2) 17.7 0.0177 P0.5 retina ATGCTAAAAA 11.8 0.0118 P0.5 retina GATTGTTTAT 3.9 0.0039 P0.5 retina GCGGAGATGA (2) 2 0.002 P2.5 retina GTCACACCAC (2) 15.8 0.0158 P2.5 retina ATGCTAAAAA 12.3 0.0123 P2.5 retina GGTTGGGGGG (2) 3.5 0.0035 P2.5 retina AATGGCCCTT (2) 1.8 0.0018 P2.5 retina CACTGGCCCT 1.8 0.0018 P2.5 retina CCTCCAAAAC 1.8 0.0018 P2.5 retina CCTGCTGCCA 1.8 0.0018 P4.5 retina ATGCTAAAAA 7.9 0.0079 P4.5 retina GTCACACCAC (2) 7.9 0.0079 P4.5 retina CCTGCTCTGA (4) 4 0.004 P4.5 retina ATGCTATATG (2) 2 0.002 P4.5 retina CAGCTGTGAG (2) 2 0.002 P4.5 retina CCTCCAAAAC 2 0.002 P4.5 retina CTGGAGGTGA 2 0.002 P4.5 retina GATTGTTTAT 2 0.002 P6.5 retina ATGCTAAAAA 5 0.005 P6.5 retina GTCACACCAC (2) 5 0.005 P6.5 retina CCCTGATGCT (3) 3.3 0.0033 P6.5 retina AATGGCCCTT (2) 1.7 0.0017 P6.5 retina ATGCTATATG (2) 1.7 0.0017 P6.5 retina CCTGCTCTGA (4) 1.7 0.0017 P6.5 retina TCACCACCAC 1.7 0.0017 P10.5 crx- retina ATGCTAAAAA 3.7 0.0037 P10.5 crx- retina AATGGCCCTT (2) 1.9 0.0019 P10.5 crx- retina AGGATGCTAG (2) 1.9 0.0019 P10.5 crx- retina ATGCTATATG (2) 1.9 0.0019 P10.5 crx- retina CCCTGATGCT (3) 1.9 0.0019 P10.5 crx- retina CCTCCAAAAC 1.9 0.0019 P10.5 crx- retina CCTGCTCTGA (4) 1.9 0.0019 P10.5 crx- retina GTCACACCAC (2) 1.9 0.0019 P10.5 crx- retina TCACCACCAC 1.9 0.0019 P10.5 crx+ retina GTCACACCAC (2) 21.1 0.0211 P10.5 crx+ retina ATGCTAAAAA 9.6 0.0096 P10.5 crx+ retina AATGGCCCTT (2) 1.9 0.0019 P10.5 crx+ retina GCGGAGATGA (2) 1.9 0.0019 Adult retinal CCCTGATGCT (3) 3.7 0.0037 Adult retinal CCTCCAAAAC 3.7 0.0037 Adult retinal CCTGCTGCCA 3.7 0.0037 Adult retinal AATGGCCCTT (2) 1.9 0.0019 Adult retinal CCTGCTCTGA (4) 1.9 0.0019 Adult retinal CTGGAGGTGA 1.9 0.0019 ONL CCTGCTCTGA (4) 3.8 0.0038 ONL GTCACACCAC (2) 3.8 0.0038 ONL ATGCTAAAAA 1.9 0.0019 ONL CCTGCTGCCA 1.9 0.0019